Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 3.2e-44 181.4 93 100.0
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 1.9e-33 145.6 88 84.1
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 7.3e-33 143.7 88 83.0
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 9.5e-33 143.3 90 80.0
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.1e-32 142.1 95 80.0
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.1e-32 142.1 95 80.0
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 2.1e-32 142.1 88 81.8
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.8e-32 141.7 87 83.9
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 1.1e-31 139.8 88 81.8
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 1.4e-31 139.4 88 80.7
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.8e-31 139.0 95 76.8
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 2.3e-31 138.7 88 80.7
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 3.1e-31 138.3 88 80.7
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 3.1e-31 138.3 90 78.9
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 4.0e-31 137.9 88 80.7
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 4.0e-31 137.9 89 82.0
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 6.8e-31 137.1 90 76.7
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 8.9e-31 136.7 88 79.5
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 1.5e-30 136.0 88 78.4
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.5e-30 136.0 90 76.7
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 1.5e-30 136.0 90 76.7
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 1.5e-30 136.0 89 77.5
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 2.0e-30 135.6 90 75.6
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 2.0e-30 135.6 95 75.8
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 4.4e-30 134.4 88 80.7
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 4.4e-30 134.4 82 82.9
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 5.8e-30 134.0 90 75.6
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 5.8e-30 134.0 88 79.5
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 5.8e-30 134.0 90 76.7
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 7.5e-30 133.7 90 78.9
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 9.8e-30 133.3 89 79.8
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 9.8e-30 133.3 89 79.8
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 1.7e-29 132.5 88 79.5
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 2.2e-29 132.1 89 78.7
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 2.9e-29 131.7 89 78.7
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 2.9e-29 131.7 89 78.7
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 2.9e-29 131.7 84 79.8
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 3.7e-29 131.3 89 75.3
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 3.2e-28 128.3 90 75.6
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.4e-28 127.5 88 76.1
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 7.1e-28 127.1 88 75.0
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 1.2e-27 126.3 88 72.7
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 1.2e-27 126.3 89 74.2
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 2.1e-27 125.6 89 74.2
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 2.1e-27 125.6 84 76.2
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 2.1e-27 125.6 88 75.0
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 3.5e-27 124.8 89 69.7
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 4.6e-27 124.4 80 77.5
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 4.6e-27 124.4 92 70.7
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 7.8e-27 123.6 80 78.8
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.0e-26 123.2 88 73.9
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.0e-26 123.2 88 73.9
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 1.7e-26 122.5 88 70.5
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.7e-26 122.5 79 81.0
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 2.3e-26 122.1 88 70.5
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 3.0e-26 121.7 77 81.8
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 3.9e-26 121.3 83 75.9
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 3.9e-26 121.3 81 76.5
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 5.1e-26 120.9 84 75.0
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 5.1e-26 120.9 81 76.5
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 5.1e-26 120.9 88 71.6
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 5.1e-26 120.9 75 82.7
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 6.6e-26 120.6 89 74.2
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 1.5e-25 119.4 81 76.5
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 1.9e-25 119.0 81 77.8
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 1.9e-25 119.0 89 68.5
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.9e-25 119.0 89 69.7
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 1.9e-25 119.0 88 71.6
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 1.9e-25 119.0 88 71.6
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 2.5e-25 118.6 88 70.5
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 3.3e-25 118.2 89 68.5
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 3.3e-25 118.2 89 68.5
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 3.3e-25 118.2 81 74.1
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 4.3e-25 117.9 85 67.1
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 5.6e-25 117.5 88 70.5
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 7.3e-25 117.1 83 74.7
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 9.5e-25 116.7 80 73.8
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 1.2e-24 116.3 81 74.1
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 1.2e-24 116.3 81 74.1
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.1e-24 115.5 88 63.6
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.1e-24 115.5 88 63.6
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 2.1e-24 115.5 84 71.4
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 2.8e-24 115.2 80 72.5
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 2.8e-24 115.2 83 72.3
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 2.8e-24 115.2 81 74.1
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 4.7e-24 114.4 77 75.3
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 6.2e-24 114.0 89 66.3
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 8.1e-24 113.6 83 73.5
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 1.4e-23 112.8 88 69.3
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 1.8e-23 112.5 82 73.2
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 1.8e-23 112.5 82 73.2
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 1.8e-23 112.5 88 67.0
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 2.3e-23 112.1 82 73.2
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.3e-23 112.1 68 83.8
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 4.0e-23 111.3 82 72.0
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 5.2e-23 110.9 76 72.4
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 8.9e-23 110.2 83 71.1
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 4.4e-22 107.8 87 60.9
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 2.2e-21 105.5 69 81.2
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 8.4e-21 103.6 69 76.8
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 5.4e-20 100.9 72 70.8
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 7.1e-20 100.5 83 61.4
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-18 95.9 63 73.0
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 3.9e-18 94.7 87 63.2
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 7.3e-17 90.5 76 60.5
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.6e-16 89.4 77 58.4
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 2.1e-16 89.0 66 74.2
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 8.1e-16 87.0 77 64.9
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 4.0e-15 84.7 82 57.3
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 6.9e-07 57.4 40 67.5
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 3.4e-06 55.1 81 38.3


User provided reference genes

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