Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 4.8e-70 267.7 133 100.0
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 2.6e-68 261.9 133 97.7
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 3.2e-58 228.4 133 81.2
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 3.2e-58 228.4 133 82.0
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 3.2e-58 228.4 133 83.5
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 5.5e-58 227.6 133 81.2
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 2.7e-57 225.3 133 80.5
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 4.6e-57 224.6 133 79.7
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 1.4e-56 223.0 133 79.7
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 81.2
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 80.5
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 3.0e-56 221.9 127 81.1
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 3.0e-56 221.9 133 81.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 3.9e-56 221.5 133 81.2
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 81.2
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 78.2
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 78.9
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.1e-55 219.9 133 78.9
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 78.2
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 78.2
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 78.2
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 2.0e-55 219.2 133 77.4
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 2.0e-55 219.2 133 78.9
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.3e-55 218.4 130 80.0
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 3.3e-55 218.4 133 77.4
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 3.3e-55 218.4 133 78.9
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 5.7e-55 217.6 131 79.4
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 78.2
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 9.7e-55 216.9 132 78.8
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 77.4
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 2.2e-54 215.7 130 80.0
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 2.2e-54 215.7 132 80.3
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 6.3e-54 214.2 133 73.7
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.8e-53 212.6 133 78.2
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 2.4e-53 212.2 133 76.7
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.4e-53 212.2 133 78.2
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 2.4e-53 212.2 133 75.9
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 3.1e-53 211.8 133 75.9
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 3.1e-53 211.8 139 76.3
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 1.2e-52 209.9 133 76.7
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 2.6e-52 208.8 140 73.6
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 3.4e-52 208.4 133 75.9
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 5.9e-52 207.6 133 75.2
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 7.7e-52 207.2 130 74.6
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.3e-51 206.5 134 76.1
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.1e-50 203.4 133 74.4
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 3.2e-50 201.8 114 83.3
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 1.2e-49 199.9 128 73.4
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 2.1e-49 199.1 133 72.2
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.6e-49 198.4 118 78.0
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 69.2
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 7.9e-49 197.2 133 68.4
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 1.0e-48 196.8 133 69.2
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 1.0e-48 196.8 133 68.4
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.8e-48 196.1 133 68.4
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 2.3e-48 195.7 133 69.2
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 2.3e-48 195.7 133 72.2
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 3.9e-48 194.9 133 68.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 3.9e-48 194.9 113 81.4
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 3.9e-48 194.9 181 57.5
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.5e-47 193.0 133 68.4
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 66.9
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 66.2
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 7.4e-47 190.7 133 67.7
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 9.7e-47 190.3 113 78.8
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.7e-46 189.5 133 68.4
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 4.8e-46 188.0 133 68.4
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 8.2e-46 187.2 176 55.7
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 5.3e-45 184.5 129 74.4
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 3.8e-43 178.3 113 75.2
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.4e-42 176.4 102 78.4
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 4.2e-42 174.9 139 61.2
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 2.1e-41 172.6 128 64.1
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 2.7e-41 172.2 105 76.2
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 2.3e-40 169.1 128 63.3
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 3.9e-40 168.3 127 60.6
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 8.8e-40 167.2 98 78.6
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.1e-39 166.8 105 75.2
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.0e-39 166.0 105 75.2
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 5.7e-39 164.5 105 69.5
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 1.3e-38 163.3 103 71.8
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 1.7e-38 162.9 92 82.6
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.1e-37 160.2 121 59.5
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 3.1e-37 158.7 98 77.6
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.6e-36 156.4 96 75.0
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 3.0e-32 142.1 122 58.2
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 9.7e-31 137.1 133 59.4
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 4.8e-30 134.8 111 54.1
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.2e-28 130.2 133 56.4
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.7e-27 126.3 111 55.9
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 8.0e-25 117.5 70 77.1
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.5e-23 113.2 102 53.9
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 7.5e-23 110.9 129 41.9
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 5.0e-19 98.2 130 38.5
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.9e-18 96.3 61 77.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 9.5e-18 94.0 67 68.7
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 2.1e-17 92.8 109 43.1
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 2.7e-12 75.9 70 55.7
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.3e-11 73.6 94 34.0
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 1.3e-11 73.6 47 63.8
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 6.1e-09 64.7 51 66.7
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 4.4e-07 58.5 36 69.4
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 3.7e-06 55.5 57 42.1
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 4.9e-06 55.1 34 61.8


User provided reference genes

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