Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 1.4e-75 286.2 140 100.0
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 2.3e-59 232.3 137 78.8
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 5.2e-59 231.1 134 79.1
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 6.8e-59 230.7 134 79.1
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 2.6e-58 228.8 137 78.1
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.6e-58 228.8 134 77.6
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 2.6e-58 228.8 140 77.9
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 5.8e-58 227.6 134 76.1
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 9.8e-58 226.9 137 77.4
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 9.8e-58 226.9 134 77.6
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 1.3e-57 226.5 137 77.4
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 3.7e-57 224.9 143 76.2
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 6.4e-57 224.2 135 77.0
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 6.4e-57 224.2 136 75.7
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.1e-56 223.4 134 75.4
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.1e-56 223.4 133 75.2
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.1e-56 223.4 143 75.5
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.4e-56 223.0 134 75.4
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.4e-56 223.0 134 76.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.4e-56 222.2 134 75.4
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 4.1e-56 221.5 134 78.4
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 5.4e-56 221.1 134 74.6
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.6e-55 219.5 134 76.9
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.1e-55 219.2 134 74.6
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 2.7e-55 218.8 135 74.8
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 6.0e-55 217.6 133 74.4
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 7.8e-55 217.2 134 74.6
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 7.8e-55 217.2 134 73.9
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 7.8e-55 217.2 132 77.3
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.0e-54 216.9 134 73.9
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 2.3e-54 215.7 134 73.1
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.3e-54 215.7 133 75.9
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 3.0e-54 215.3 134 70.9
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 3.9e-54 214.9 133 72.9
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 8.6e-54 213.8 139 74.1
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.5e-53 213.0 139 71.9
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.9e-53 212.6 134 75.4
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.9e-53 212.6 132 73.5
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 2.5e-53 212.2 138 74.6
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.5e-53 212.2 138 71.7
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.5e-53 212.2 132 75.0
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 2.5e-53 212.2 134 70.9
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 3.3e-53 211.8 132 75.0
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 4.3e-53 211.5 135 72.6
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 4.3e-53 211.5 135 71.9
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 7.3e-53 210.7 130 74.6
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.5e-53 210.3 137 70.8
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.2e-52 209.9 132 75.8
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.2e-52 209.9 134 72.4
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.2e-52 209.9 134 72.4
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.2e-52 209.9 132 72.0
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.1e-52 209.1 136 72.1
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 2.1e-52 209.1 132 72.0
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 2.8e-52 208.8 132 75.8
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.8e-52 208.8 137 69.3
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.8e-52 208.8 134 69.4
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 2.8e-52 208.8 134 73.1
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 2.8e-52 208.8 134 70.1
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.6e-52 208.4 132 71.2
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 6.2e-52 207.6 135 71.9
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.4e-51 206.5 134 73.1
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.4e-51 206.5 138 73.2
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 3.1e-51 205.3 135 68.1
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 4.0e-51 204.9 135 68.1
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 6.8e-51 204.1 132 68.9
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 2.6e-50 202.2 138 68.1
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 4.4e-50 201.4 118 80.5
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 7.6e-50 200.7 138 66.7
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 7.6e-50 200.7 134 72.4
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 9.9e-50 200.3 137 70.1
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.7e-49 199.5 133 68.4
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 1.7e-49 199.5 135 68.1
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.7e-49 199.5 133 68.4
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.7e-49 199.5 112 80.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 3.8e-49 198.4 118 78.0
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 4.9e-49 198.0 133 67.7
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.1e-48 196.8 135 67.4
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.1e-48 196.8 133 68.4
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.9e-48 196.1 134 67.2
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.9e-48 196.1 120 75.8
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 2.4e-48 195.7 133 67.7
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 4.1e-48 194.9 135 69.6
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 5.4e-48 194.5 116 77.6
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 7.1e-48 194.1 135 70.4
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.2e-47 193.4 133 68.4
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 1.6e-47 193.0 137 66.4
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.7e-47 192.2 126 69.0
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 2.7e-47 192.2 126 69.0
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.7e-47 192.2 135 69.6
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 4.6e-47 191.4 136 66.2
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 7.8e-47 190.7 137 67.2
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 2.3e-46 189.1 136 65.4
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 3.0e-46 188.7 133 66.2
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 3.9e-46 188.3 133 69.9
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 5.1e-46 188.0 136 66.9
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 6.6e-46 187.6 127 70.9
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.9e-45 186.0 127 70.9
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 2.5e-45 185.7 137 65.7
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 4.3e-45 184.9 133 65.4
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 7.3e-45 184.1 136 64.0
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 9.6e-45 183.7 115 73.0
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 3.1e-43 178.7 134 63.4
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 5.2e-43 177.9 135 64.4
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 5.2e-43 177.9 128 66.4
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 8.9e-43 177.2 110 74.5
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.2e-42 176.8 131 63.4
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 2.0e-42 176.0 139 60.4
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 4.4e-42 174.9 120 70.8
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 4.4e-42 174.9 116 70.7
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.3e-41 173.3 133 59.4
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 5.4e-40 167.9 132 61.4
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 3.5e-39 165.2 107 72.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.3e-37 158.7 128 61.7
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 4.3e-37 158.3 134 55.2
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.2e-34 150.2 108 68.5
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.7e-33 146.4 116 55.2
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.8e-33 145.2 97 71.1
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 6.4e-33 144.4 124 51.6
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 8.4e-33 144.1 121 52.9
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.1e-32 143.7 121 53.7
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.4e-32 142.5 124 54.8
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 1.6e-31 139.8 104 62.5
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 2.7e-31 139.0 89 73.0
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 2.7e-31 139.0 117 53.8
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.1e-28 129.4 109 55.0
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 8.1e-28 127.5 84 67.9
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.4e-27 126.7 85 68.2
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.4e-24 116.7 119 45.4
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.9e-22 108.6 90 57.8
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 3.9e-14 82.0 86 50.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.9e-14 82.0 53 71.7
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 2.5e-08 62.8 57 50.9
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 2.3e-06 56.2 43 60.5


User provided reference genes

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