Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 0.0e+00 1167.1 598 100.0
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 4.6e-221 771.5 612 67.2
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 6.2e-218 761.1 620 65.5
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 1.3e-212 743.4 655 61.8
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 6.9e-209 731.1 618 63.3
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 2.9e-207 725.7 627 63.3
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 4.9e-207 724.9 617 62.1
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 9.3e-206 720.7 608 62.0
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 2.7e-205 719.2 619 62.4
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 7.9e-205 717.6 612 61.9
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.9e-204 715.3 625 61.0
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 5.6e-203 711.4 611 61.4
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 2.6e-200 702.6 623 61.5
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 2.9e-199 699.1 614 60.6
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 6.4e-199 698.0 626 59.7
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.1e-198 697.2 613 61.3
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 6.0e-197 691.4 603 60.2
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 6.0e-197 691.4 618 59.9
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 1.5e-195 686.8 621 59.9
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 4.8e-194 681.8 622 58.2
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 8.1e-194 681.0 625 60.0
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 1.1e-193 680.6 617 59.0
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 1.1e-193 680.6 625 59.8
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 2.4e-193 679.5 622 60.1
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 1.5e-192 676.8 654 58.3
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.3e-191 673.7 594 59.9
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 6.5e-191 671.4 579 60.4
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 8.4e-191 671.0 622 59.3
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 2.5e-190 669.5 635 58.0
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 3.2e-190 669.1 603 59.0
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 5.5e-190 668.3 622 59.2
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 5.1e-188 661.8 639 57.6
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 2.8e-186 656.0 620 57.3
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 2.0e-184 649.8 635 56.9
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 2.6e-184 649.4 522 66.3
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 2.2e-183 646.4 640 55.2
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 2.3e-180 636.3 622 55.9
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 3.0e-180 636.0 541 61.0
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 8.7e-180 634.4 628 54.9
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 3.7e-178 629.0 616 55.0
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 6.3e-178 628.2 570 59.5
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 2.4e-177 626.3 609 54.8
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 3.4e-176 622.5 601 58.6
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 5.9e-176 621.7 531 60.8
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 5.9e-176 621.7 616 56.0
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 2.2e-175 619.8 620 55.6
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 8.5e-175 617.8 621 56.4
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 1.4e-174 617.1 521 59.3
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.2e-173 614.0 672 52.1
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 7.9e-173 611.3 616 54.9
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 7.9e-173 611.3 600 55.7
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.3e-172 609.8 582 57.2
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 3.0e-172 609.4 618 54.9
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 8.8e-172 607.8 583 54.7
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 2.0e-171 606.7 617 54.6
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 5.7e-171 605.1 577 56.7
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 2.2e-170 603.2 582 56.7
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 6.3e-170 601.7 622 53.5
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 4.1e-169 599.0 607 55.2
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 6.9e-169 598.2 579 55.1
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 3.4e-168 595.9 583 54.7
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.0e-167 594.3 564 57.3
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 3.8e-167 592.4 561 55.8
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.4e-166 590.5 570 54.6
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.1e-165 586.6 561 54.9
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 2.7e-165 586.3 611 54.2
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 1.0e-164 584.3 610 55.1
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.8e-164 583.6 605 53.7
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 2.3e-164 583.2 638 51.6
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 3.0e-164 582.8 597 54.1
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 2.6e-163 579.7 611 52.5
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.8e-161 573.5 551 55.2
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 4.1e-161 572.4 640 51.4
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 9.1e-161 571.2 505 58.6
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 5.9e-160 568.5 528 56.8
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 1.7e-159 567.0 574 54.4
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 2.5e-158 563.1 608 51.2
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 2.5e-158 563.1 613 51.7
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 1.6e-157 560.5 548 54.2
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 6.1e-157 558.5 619 51.4
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 1.0e-156 557.8 551 54.6
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 2.3e-156 556.6 551 54.3
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 3.0e-156 556.2 581 52.8
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 6.7e-156 555.1 659 49.3
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 1.1e-155 554.3 506 57.1
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 4.5e-152 542.3 630 50.2
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 8.5e-151 538.1 636 49.8
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 1.0e-148 531.2 571 51.0
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.6e-144 517.3 493 55.2
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 1.5e-142 510.8 608 47.5
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.3e-138 497.7 417 60.7
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.4e-137 494.2 558 50.0
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 2.4e-137 493.4 520 51.7
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.0e-135 488.0 642 47.0
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 1.6e-133 480.7 605 46.1
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 3.5e-128 463.0 489 51.3
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 7.8e-128 461.8 410 56.8
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 3.8e-98 363.2 451 48.8
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 4.8e-93 346.3 534 38.6
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 3.8e-90 336.7 471 41.2
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 2.1e-88 330.9 618 35.3
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 5.8e-83 312.8 615 36.4
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.2e-72 278.5 194 70.6
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.8e-69 267.3 312 52.6
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 3.6e-56 223.8 189 63.0
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 9.1e-52 209.1 317 37.9
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 6.3e-37 159.8 568 28.0
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 2.6e-30 137.9 442 27.4
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 1.4e-28 132.1 578 23.5
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 3.5e-27 127.5 361 30.2
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 1.5e-25 122.1 167 44.9
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.8e-21 107.8 125 51.2
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 2.8e-21 107.8 125 51.2
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.3e-21 106.7 125 51.2
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.3e-21 106.7 125 51.2
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 1.5e-14 85.5 68 64.7
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 3.4e-14 84.3 123 40.7
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 1.3e-10 72.4 190 32.1
AL142U10030 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 3.6e-08 64.3 377 23.3
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 3.6e-08 64.3 377 23.3
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 4.7e-08 63.9 79 48.1
AT1G77620 Arabidopsis thaliana HOM05D004094 ORTHO05D004601 6.8e-07 60.1 381 22.6
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 2.6e-06 58.2 373 22.8
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 4.4e-06 57.4 286 23.8


User provided reference genes

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