Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 8.0e-261 904.4 1052 100.0
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 1.9e-89 335.1 475 50.1
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 2.2e-29 135.6 193 45.1
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 3.8e-29 134.8 184 46.2
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 8.5e-29 133.7 152 50.7
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 1.1e-28 133.3 261 39.1
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 3.6e-27 128.3 351 33.0
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 2.3e-26 125.6 224 41.5
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 3.0e-26 125.2 188 45.7
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 4.0e-26 124.8 307 35.5
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 8.8e-26 123.6 195 44.1
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 4.4e-25 121.3 156 49.4
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.7e-24 119.4 319 35.4
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 2.2e-24 119.0 193 42.0
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 2.2e-24 119.0 239 40.6
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.8e-24 118.6 165 44.2
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 4.8e-24 117.9 180 43.9
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 1.1e-23 116.7 116 54.3
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 1.1e-23 116.7 208 40.9
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 1.1e-23 116.7 435 31.7
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.4e-23 116.3 462 30.7
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 3.1e-23 115.2 154 42.9
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 3.1e-23 115.2 160 41.9
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 7.0e-23 114.0 432 28.0
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 9.1e-23 113.6 251 34.3
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 9.1e-23 113.6 180 43.9
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 9.1e-23 113.6 138 49.3
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 2.7e-22 112.1 299 33.8
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 2.7e-22 112.1 299 33.8
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 2.7e-22 112.1 411 28.7
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.5e-22 111.7 180 43.3
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 4.5e-22 111.3 146 45.2
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 4.5e-22 111.3 182 40.7
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 7.7e-22 110.5 319 31.3
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 7.7e-22 110.5 342 32.2
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 1.0e-21 110.2 154 44.8
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 1.0e-21 110.2 432 31.7
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 2.2e-21 109.0 405 28.4
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 2.9e-21 108.6 363 29.5
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 2.9e-21 108.6 350 32.9
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 3.8e-21 108.2 139 43.9
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 8.5e-21 107.1 338 29.9
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.1e-20 106.7 422 27.3
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.1e-20 106.7 303 34.0
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.5e-20 106.3 303 34.0
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 3.2e-20 105.1 317 32.2
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 3.2e-20 105.1 299 29.4
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 9.4e-20 103.6 156 41.0
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 9.4e-20 103.6 467 29.1
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 2.7e-19 102.1 443 27.5
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 3.6e-19 101.7 114 46.5
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 1.0e-18 100.1 392 31.1
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.0e-18 100.1 238 34.9
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 1.0e-18 100.1 262 32.8
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 1.4e-18 99.8 193 38.3
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 1.4e-18 99.8 525 27.6
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 3.0e-18 98.6 500 30.2
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 3.0e-18 98.6 197 35.5
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 5.2e-18 97.8 346 30.6
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 6.8e-18 97.4 197 38.6
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 5.7e-17 94.4 329 28.6
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 1.3e-16 93.2 478 27.0
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 2.2e-16 92.4 176 36.9
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 2.2e-16 92.4 147 40.1
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 2.2e-16 92.4 432 27.1
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 2.2e-16 92.4 371 28.8
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 3.7e-16 91.7 144 40.3
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 3.7e-16 91.7 201 34.8
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 4.9e-16 91.3 182 31.9
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 4.9e-16 91.3 116 44.8
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 6.3e-16 90.9 195 35.9
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 8.3e-16 90.5 180 38.3
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 8.3e-16 90.5 329 28.3
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 8.3e-16 90.5 156 41.7
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 1.1e-15 90.1 132 42.4
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 1.1e-15 90.1 176 35.8
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 1.1e-15 90.1 132 42.4
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 1.4e-15 89.7 141 38.3
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 1.8e-15 89.4 458 27.5
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 1.8e-15 89.4 279 31.2
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 2.4e-15 89.0 385 30.4
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 3.1e-15 88.6 178 38.8
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 3.1e-15 88.6 460 27.6
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 7.0e-15 87.4 177 36.7
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 1.2e-14 86.7 279 30.8
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 2.0e-14 85.9 133 42.1
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 3.5e-14 85.1 443 29.1
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.5e-14 84.7 404 26.7
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 1.0e-13 83.6 479 26.9
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 2.9e-13 82.0 219 33.3
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 3.8e-13 81.6 405 27.7
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 5.0e-13 81.3 135 43.0
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 6.6e-13 80.9 367 27.8
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.9e-12 79.3 486 25.1
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 2.5e-12 79.0 228 32.9
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 4.3e-12 78.2 103 44.7
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 7.2e-12 77.4 351 27.1
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 9.5e-12 77.0 395 27.1
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 1.2e-11 76.6 251 32.7
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 2.8e-11 75.5 432 25.0
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 4.7e-11 74.7 189 33.9
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 1.0e-10 73.6 436 25.7
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 6.8e-10 70.9 469 26.2
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 8.9e-10 70.5 406 24.1
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 1.5e-09 69.7 443 25.7
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 3.4e-09 68.6 166 31.3
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 4.4e-09 68.2 245 29.0
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 5.7e-09 67.8 109 40.4
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 7.5e-09 67.4 111 41.4
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 9.8e-09 67.0 207 31.4
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 3.7e-08 65.1 188 30.9
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 4.9e-08 64.7 128 34.4
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 4.9e-08 64.7 146 34.9
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 8.3e-08 63.9 140 32.1
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 1.4e-07 63.2 238 29.4
CiPaw.02G043100 Carya illinoinensis HOM05D004242 ORTHO05D004349 5.4e-07 61.2 137 31.4
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 5.4e-07 61.2 167 32.3
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 9.2e-07 60.5 155 31.0
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 9.2e-07 60.5 135 31.9
PSO210G2709 Papaver somniferum HOM05D004242 ORTHO05D004349 2.0e-06 59.3 101 38.6
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 2.7e-06 58.9 147 34.7
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 3.5e-06 58.5 118 31.4
Glyma.19G258400 Glycine max HOM05D004242 ORTHO05D004349 4.6e-06 58.2 151 30.5
Oeu042952.1 Olea europaea HOM05D004242 ORTHO05D004349 4.6e-06 58.2 103 35.0
Sopen08g021310 Solanum pennellii HOM05D004242 ORTHO05D004349 4.6e-06 58.2 219 31.1
Lj3g0014324 Lotus japonicus HOM05D004242 ORTHO05D004349 5.9e-06 57.8 161 28.6
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 7.8e-06 57.4 103 37.9


User provided reference genes

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