Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 1.2e-161 573.2 292 100.0
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 4.8e-123 444.9 289 78.5
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 2.3e-117 426.0 288 75.3
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 3.3e-116 422.2 281 77.2
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 1.7e-115 419.9 299 74.9
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 1.8e-114 416.4 287 75.3
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 1.8e-114 416.4 296 74.0
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 4.1e-114 415.2 286 73.8
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 6.9e-114 414.5 291 72.5
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 9.1e-114 414.1 292 72.6
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.5e-113 413.3 276 75.4
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 7.7e-113 411.0 286 73.4
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.3e-112 410.2 280 76.1
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.3e-112 410.2 285 74.7
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 5.0e-112 408.3 288 73.6
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.1e-111 407.1 308 70.1
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 1.9e-111 406.4 282 73.8
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 1.6e-110 403.3 288 71.9
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 7.9e-110 401.0 292 71.9
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 7.9e-110 401.0 287 72.1
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 3.0e-109 399.1 292 73.6
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 5.2e-109 398.3 284 70.8
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 8.8e-109 397.5 288 70.8
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 1.3e-107 393.7 342 63.2
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 1.7e-107 393.3 283 70.3
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 2.4e-106 389.4 286 69.9
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 2.4e-106 389.4 288 69.1
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 3.1e-106 389.0 254 75.2
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 5.3e-106 388.3 260 72.3
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 7.0e-106 387.9 287 66.6
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 3.5e-105 385.6 282 70.6
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 4.5e-105 385.2 264 72.0
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 1.0e-104 384.0 267 71.9
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 2.2e-104 382.9 285 66.3
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 2.2e-104 382.9 287 69.3
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 5.0e-104 381.7 278 71.6
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 5.0e-104 381.7 264 71.6
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 8.5e-104 380.9 310 64.8
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 8.5e-104 380.9 284 69.4
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 1.1e-103 380.6 264 72.0
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 1.1e-103 380.6 285 69.8
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 1.5e-103 380.2 285 68.8
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.5e-103 379.4 284 68.0
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 3.2e-103 379.0 294 66.0
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 3.2e-103 379.0 318 64.2
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 5.5e-103 378.3 234 81.6
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 1.2e-102 377.1 292 65.8
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 4.7e-102 375.2 287 66.2
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 1.0e-101 374.0 288 66.3
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.0e-101 374.0 294 65.6
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 8.8e-101 370.9 293 65.5
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 8.8e-101 370.9 295 65.4
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 3.3e-100 369.0 260 71.2
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 4.4e-100 368.6 287 66.2
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 5.7e-100 368.2 253 71.9
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 1.3e-99 367.1 295 63.7
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 1.7e-99 366.7 258 70.2
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 1.7e-99 366.7 247 71.3
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 2.2e-99 366.3 234 77.4
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 4.8e-99 365.2 303 63.0
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 6.3e-99 364.8 249 72.3
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 8.2e-99 364.4 296 63.9
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 8.2e-99 364.4 234 77.4
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 8.2e-99 364.4 294 62.9
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 8.2e-99 364.4 294 62.9
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 7.0e-98 361.3 229 76.0
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 1.2e-97 360.5 287 64.1
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 1.6e-97 360.1 228 78.1
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 2.0e-97 359.8 286 66.1
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 4.5e-97 358.6 302 62.3
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 1.3e-96 357.1 275 67.3
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 1.7e-96 356.7 304 62.2
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.7e-96 356.7 254 73.6
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 5.5e-95 351.7 303 61.7
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 7.2e-95 351.3 303 61.7
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 8.0e-94 347.8 231 72.7
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 8.0e-94 347.8 299 61.9
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 1.8e-93 346.7 231 72.3
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 2.0e-92 343.2 258 65.5
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 9.1e-90 334.3 232 70.3
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 1.2e-89 334.0 254 64.6
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 1.9e-87 326.6 254 64.6
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 8.0e-86 321.2 203 78.8
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 1.4e-85 320.5 217 74.7
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 3.4e-84 315.8 239 68.2
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 6.3e-83 311.6 218 70.6
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.7e-81 306.2 205 75.6
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 8.6e-80 301.2 203 73.9
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 3.0e-77 292.7 207 69.6
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 4.9e-75 285.4 266 58.6
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 3.5e-73 279.3 247 56.7
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.7e-72 276.9 183 70.5
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 9.5e-71 271.2 205 66.8
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 2.8e-70 269.6 287 51.9
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 2.0e-68 263.5 214 66.8
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.7e-67 260.4 263 49.8
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 2.9e-67 259.6 258 50.4
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 7.8e-65 251.5 209 63.2
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 5.6e-63 245.4 169 73.4
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 4.7e-62 242.3 247 52.2
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 3.5e-57 226.1 264 46.6
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 9.9e-52 208.0 290 44.1
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 3.8e-51 206.1 288 48.3
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 5.1e-48 195.7 134 72.4
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.2e-36 157.9 116 69.8
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 1.6e-30 137.5 170 44.7
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 6.4e-27 125.6 101 62.4
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.6e-25 120.9 101 61.4
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 8.7e-24 115.2 339 29.2
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 1.1e-18 98.2 199 33.7
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 1.6e-14 84.3 102 49.0
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 1.6e-14 84.3 102 49.0
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 2.8e-14 83.6 103 51.5
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 2.6e-12 77.0 48 75.0
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 6.1e-09 65.9 265 22.6
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 7.9e-09 65.5 83 48.2
Haze_10306 Corylus avellana HOM05D000031 ORTHO05D001033 1.8e-08 64.3 58 63.8
Atru.chr5.1458 Acer truncatum HOM05D003798 ORTHO05D004652 2.3e-08 63.9 46 60.9
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 3.3e-07 60.1 50 56.0
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 7.4e-07 58.9 50 54.0
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 7.4e-07 58.9 50 54.0
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 7.4e-07 58.9 50 54.0


User provided reference genes

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