Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3357 Cannabis sativa HOM05D005827 ORTHO05D005864 5.2e-40 167.5 102 100.0
CANSAT11G0172 Cannabis sativa HOM05D005827 ORTHO05D005864 7.8e-20 100.5 82 82.9
Manes.10G074300 Manihot esculenta HOM05D005827 ORTHO05D005864 6.8e-16 87.4 55 74.5
Duzib132G0170 Durio zibethinus HOM05D005827 ORTHO05D005864 1.5e-15 86.3 59 71.2
Eucgr.G01363 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.5e-15 86.3 57 73.7
Eucgr.H03226 Eucalyptus grandis HOM05D005827 ORTHO05D005864 1.5e-15 86.3 57 73.7
Thecc.02G106700 Theobroma cacao HOM05D005827 ORTHO05D005864 2.0e-15 85.9 55 72.7
Atru.chr5.2579 Acer truncatum HOM05D005827 ORTHO05D005864 3.4e-15 85.1 81 60.5
Prupe.1G568500 Prunus persica HOM05D005827 ORTHO05D005864 3.4e-15 85.1 82 53.7
CiPaw.06G170100 Carya illinoinensis HOM05D005827 ORTHO05D005864 4.4e-15 84.7 58 72.4
Haze_10160 Corylus avellana HOM05D005827 ORTHO05D005864 4.4e-15 84.7 55 74.5
Ciclev10030223m.g Citrus clementina HOM05D005827 ORTHO05D005864 1.7e-14 82.8 55 74.5
COL.COLO4_32605 Corchorus olitorius HOM05D005827 ORTHO05D005864 1.7e-14 82.8 82 64.6
Gohir.D02G207600 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.7e-14 82.8 53 71.7
Gorai.005G235500 Gossypium raimondii HOM05D005827 ORTHO05D005864 1.7e-14 82.8 53 71.7
Hma1.2p1_0796F.1_g219120 Hydrangea macrophylla HOM05D005827 ORTHO05D005864 3.7e-14 81.6 82 58.5
Potri.009G097000 Populus trichocarpa HOM05D005827 ORTHO05D005864 3.7e-14 81.6 55 74.5
QL11p034047 Quercus lobata HOM05D005827 ORTHO05D005864 8.3e-14 80.5 54 72.2
MELO3C003274.2 Cucumis melo HOM05D005827 ORTHO05D005864 1.1e-13 80.1 65 61.5
CsaV3_4G029930 Cucumis sativus L. HOM05D005827 ORTHO05D005864 1.1e-13 80.1 65 61.5
Gohir.A03G186800 Gossypium hirsutum HOM05D005827 ORTHO05D005864 1.8e-13 79.3 53 67.9
CSS0006486 Camellia sinensis var. sinensis HOM05D005827 ORTHO05D005864 2.4e-13 79.0 81 50.6
MD15G1423200 Malus domestica HOM05D005827 ORTHO05D005864 2.4e-13 79.0 82 59.8
Sed0003004 Sechium edule HOM05D005827 ORTHO05D005864 3.2e-13 78.6 56 69.6
MSTRG.27741 Avicennia marina HOM05D005827 ORTHO05D005864 4.1e-13 78.2 55 61.8
Dinv15756 Davidia involucrata HOM05D005827 ORTHO05D005864 4.1e-13 78.2 82 50.0
Migut.N01172 Erythranthe guttata HOM05D005827 ORTHO05D005864 7.0e-13 77.4 54 64.8
MD08G1229200 Malus domestica HOM05D005827 ORTHO05D005864 7.0e-13 77.4 84 45.2
QL11p033993 Quercus lobata HOM05D005827 ORTHO05D005864 7.0e-13 77.4 53 71.7
ClCG04G002790 Citrullus lanatus HOM05D005827 ORTHO05D005864 9.2e-13 77.0 58 62.1
QL11p034007 Quercus lobata HOM05D005827 ORTHO05D005864 1.6e-12 76.3 53 69.8
Peaxi162Scf00880g00322 Petunia axillaris HOM05D005827 ORTHO05D005864 2.0e-12 75.9 55 61.8
THA.LOC104823732 Tarenaya hassleriana HOM05D005827 ORTHO05D005864 2.0e-12 75.9 56 64.3
MELO3C033554.2 Cucumis melo HOM05D005827 ORTHO05D005864 2.7e-12 75.5 65 58.5
Rhsim11G0160600 Rhododendron simsii HOM05D005827 ORTHO05D005864 2.7e-12 75.5 79 50.6
TWI31G0230 Tripterygium wilfordii HOM05D005827 ORTHO05D005864 2.7e-12 75.5 59 66.1
FAN08G1793 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.5e-12 75.1 52 69.2
FAN18G4374 Fragaria x ananassa HOM05D005827 ORTHO05D005864 3.5e-12 75.1 52 69.2
RcHm_v2.0_Chr7g0222441 Rosa chinensis HOM05D005827 ORTHO05D005864 3.5e-12 75.1 52 69.2
EL10Ac9g22299 Beta vulgaris HOM05D005827 ORTHO05D005864 4.6e-12 74.7 55 65.5
FvH4_5g29540 Fragaria vesca HOM05D005827 ORTHO05D005864 1.0e-11 73.6 52 69.2
FAN13G0291 Fragaria x ananassa HOM05D005827 ORTHO05D005864 1.0e-11 73.6 52 67.3
DCAR_029081 Daucus carota HOM05D005827 ORTHO05D005864 1.7e-11 72.8 59 57.6
Hund00127 Selenicereus undatus HOM05D005827 ORTHO05D005864 1.7e-11 72.8 47 70.2
vmacro14445 Vaccinium macrocarpon HOM05D005827 ORTHO05D005864 1.7e-11 72.8 79 58.2
Lsat_1_v5_gn_5_114720 Lactuca sativa HOM05D005827 ORTHO05D005864 3.0e-11 72.0 56 58.9
GSVIVG01003168001 Vitis vinifera HOM05D005827 ORTHO05D005864 3.0e-11 72.0 57 59.6
CAN.G517.16 Capsicum annuum HOM05D005827 ORTHO05D005864 5.0e-11 71.2 55 56.4
FAN04G0262 Fragaria x ananassa HOM05D005827 ORTHO05D005864 5.0e-11 71.2 52 65.4
Cpa.g.sc246.10 Carica papaya HOM05D005827 ORTHO05D005864 6.6e-11 70.9 66 60.6
Solyc12g056030.2 Solanum lycopersicum HOM05D005827 ORTHO05D005864 6.6e-11 70.9 54 59.3
Sopen12g028550 Solanum pennellii HOM05D005827 ORTHO05D005864 6.6e-11 70.9 54 59.3
PGSC0003DMG400005012 Solanum tuberosum HOM05D005827 ORTHO05D005864 6.6e-11 70.9 54 59.3
SGA_v2.0_scaffold42G16001 Striga asiatica HOM05D005827 ORTHO05D005864 6.6e-11 70.9 55 54.5
Hund00128 Selenicereus undatus HOM05D005827 ORTHO05D005864 8.6e-11 70.5 47 68.1
CiPaw.07G088900 Carya illinoinensis HOM05D005827 ORTHO05D005864 1.1e-10 70.1 55 65.5
Nitab4.5_0000209g0220 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.1e-10 70.1 55 56.4
ECA234G2840 Erigeron canadensis HOM05D005827 ORTHO05D005864 1.5e-10 69.7 52 61.5
HanXRQChr16g0514881 Helianthus annuus HOM05D005827 ORTHO05D005864 1.5e-10 69.7 56 55.4
Lj9A321T79 Lonicera japonica HOM05D005827 ORTHO05D005864 1.9e-10 69.3 61 54.1
Nitab4.5_0001647g0080 Nicotiana tabacum HOM05D005827 ORTHO05D005864 1.9e-10 69.3 55 56.4
SalBow3G3341 Salvia bowleyana HOM05D005827 ORTHO05D005864 1.9e-10 69.3 55 56.4
SGA_v2.0_scaffold393G50707 Striga asiatica HOM05D005827 ORTHO05D005864 2.5e-10 68.9 54 55.6
BcaB07g30381 Brassica carinata HOM05D005827 ORTHO05D005864 5.6e-10 67.8 54 53.7
A02p32240 Brassica napus HOM05D005827 ORTHO05D005864 5.6e-10 67.8 54 53.7
BraA02t08240Z Brassica rapa HOM05D005827 ORTHO05D005864 5.6e-10 67.8 54 53.7
Cc02_g19170 Coffea canephora HOM05D005827 ORTHO05D005864 5.6e-10 67.8 56 58.9
Nitab4.5_0011210g0030 Nicotiana tabacum HOM05D000771 ORTHO05D005864 5.6e-10 67.8 55 54.5
TAR625G0497 Trochodendron aralioides HOM05D005827 ORTHO05D005864 5.6e-10 67.8 79 60.8
TAR625G1254 Trochodendron aralioides HOM05D005827 ORTHO05D005864 5.6e-10 67.8 79 60.8
BcaC03g17064 Brassica carinata HOM05D005827 ORTHO05D005864 7.3e-10 67.4 54 53.7
C02p49840 Brassica napus HOM05D005827 ORTHO05D005864 7.3e-10 67.4 54 53.7
AUR62010278 Chenopodium quinoa HOM05D005827 ORTHO05D005864 7.3e-10 67.4 56 58.9
Nn1g04717 Nelumbo nucifera HOM05D005827 ORTHO05D005864 7.3e-10 67.4 56 60.7
HPP92_026144 Vanilla planifolia HOM05D005827 ORTHO05D005864 7.3e-10 67.4 57 57.9
Carub.0005s0059 Capsella rubella HOM05D005827 ORTHO05D005864 9.5e-10 67.0 54 53.7
Lj5g0000760 Lotus japonicus HOM05D005827 ORTHO05D005864 9.5e-10 67.0 54 59.3
Lalb_Chr21g0308391 Lupinus albus HOM05D005827 ORTHO05D005864 9.5e-10 67.0 58 55.2
TAR381G1673 Trochodendron aralioides HOM05D005827 ORTHO05D005864 1.2e-09 66.6 59 59.3
SEGI_38856 Sequoiadendron giganteum HOM05D005827 ORTHO05D005864 1.6e-09 66.2 58 56.9
BolC2t11063H Brassica oleracea HOM05D005827 ORTHO05D005864 2.1e-09 65.9 54 51.9
Lj3g0023632 Lotus japonicus HOM05D005827 ORTHO05D005864 2.1e-09 65.9 54 53.7
AT2G01640 Arabidopsis thaliana HOM05D005827 ORTHO05D005864 2.8e-09 65.5 51 56.9
Sp2g13090 Schrenkiella parvula HOM05D005827 ORTHO05D005864 2.8e-09 65.5 52 53.8
Sc08g0001470 Simmondsia chinensis HOM05D005827 ORTHO05D005864 2.8e-09 65.5 51 60.8
Aa31sc215G30 Aethionema arabicum HOM05D005827 ORTHO05D005864 4.7e-09 64.7 55 52.7
PSO170G4182 Papaver somniferum HOM05D005827 ORTHO05D005864 4.7e-09 64.7 64 51.6
Aqoxy5G03364 Aquilegia oxysepala HOM05D005827 ORTHO05D005864 6.2e-09 64.3 57 59.6
Psat6g219720 Pisum sativum HOM05D005827 ORTHO05D005864 6.2e-09 64.3 59 52.5
PSO210G1068 Papaver somniferum HOM05D005827 ORTHO05D005864 1.1e-08 63.5 64 51.6
arahy.Tifrunner.gnm1.ann1.M92LVR Arachis hypogaea HOM05D005827 ORTHO05D005864 1.4e-08 63.2 62 50.0
Ca_30413_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 2.3e-08 62.4 59 55.9
Sabra09G0074500 Salix brachista HOM05D005827 ORTHO05D005864 3.1e-08 62.0 91 42.9
AL5G10740 Arabidopsis lyrata HOM05D005827 ORTHO05D005864 4.0e-08 61.6 46 56.5
Ca_06388_v3 Cicer arietinum L. HOM05D005827 ORTHO05D005864 1.2e-07 60.1 52 55.8
Glyma.12G113700 Glycine max HOM05D005827 ORTHO05D005864 1.5e-07 59.7 52 53.8
PGR042G1992 Punica granatum HOM05D005827 ORTHO05D005864 1.5e-07 59.7 53 52.8
Sabra09G0074600 Salix brachista HOM05D005827 ORTHO05D005864 1.5e-07 59.7 56 57.1
Ah.01g018070 Amaranthus hybridus HOM05D007150 ORTHO05D008994 2.6e-07 58.9 40 65.0
Phvul.007G038800 Phaseolus vulgaris HOM05D005827 ORTHO05D005864 2.6e-07 58.9 56 55.4
arahy.Tifrunner.gnm1.ann1.HL4A43 Arachis hypogaea HOM05D005827 ORTHO05D005864 3.4e-07 58.5 59 47.5
Os12g0244500 Oryza sativa ssp. japonica HOM05D005827 ORTHO05D005864 5.8e-07 57.8 57 50.9
unitig_94.g28296 Utricularia gibba HOM05D005827 ORTHO05D005864 5.8e-07 57.8 53 47.2
unitig_94.g28309 Utricularia gibba HOM05D005827 ORTHO05D005864 5.8e-07 57.8 53 47.2
TPR.G13876 Trifolium pratense HOM05D005827 ORTHO05D005864 7.5e-07 57.4 59 50.8
AUR62039111 Chenopodium quinoa HOM05D005827 ORTHO05D005864 9.8e-07 57.0 35 74.3
AUR62044681 Chenopodium quinoa HOM05D005827 ORTHO05D005864 9.8e-07 57.0 35 74.3
Aa31LG2G8260 Aethionema arabicum HOM05D005827 ORTHO05D005864 1.3e-06 56.6 50 48.0
MD05G1087800 Malus domestica HOM05D005827 ORTHO05D005864 1.3e-06 56.6 55 49.1
Medtr1g107495 Medicago truncatula HOM05D005827 ORTHO05D005864 1.7e-06 56.2 59 47.5
Zm00001eb133530 Zea mays HOM05D005827 ORTHO05D005864 2.2e-06 55.8 46 56.5
Glyma.20G127400 Glycine max HOM05D005827 ORTHO05D005864 4.9e-06 54.7 52 51.9
Mapoly0052s0016 Marchantia polymorpha HOM05D005827 ORTHO05D005864 4.9e-06 54.7 52 48.1
Zm00001eb207600 Zea mays HOM05D005827 ORTHO05D005864 4.9e-06 54.7 46 58.7
Zm00001eb006370 Zea mays HOM05D005827 ORTHO05D005864 6.4e-06 54.3 46 58.7
Zm00001eb259520 Zea mays HOM05D005827 ORTHO05D005864 6.4e-06 54.3 46 58.7
Zm00001eb324360 Zea mays HOM05D005827 ORTHO05D005864 6.4e-06 54.3 46 58.7
Zm00001eb350190 Zea mays HOM05D005827 ORTHO05D005864 6.4e-06 54.3 46 58.7
ATR0827G109 Amborella trichopoda HOM05D005827 ORTHO05D005864 8.3e-06 53.9 44 54.5


User provided reference genes

Program Settings