Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3317 Cannabis sativa HOM05D010396 ORTHO05D002765 2.6e-130 468.8 244 100.0
CANSAT01G2679 Cannabis sativa HOM05D010396 ORTHO05D002765 2.8e-92 342.4 186 97.8
CANSAT78G0529 Cannabis sativa HOM05D010396 ORTHO05D002765 4.5e-90 335.1 186 96.2
CANSAT21G0992 Cannabis sativa HOM05D010396 ORTHO05D002765 1.4e-88 330.1 186 94.6
CANSAT78G0321 Cannabis sativa HOM05D010396 ORTHO05D002765 4.6e-87 325.1 186 94.1
CANSAT64G2574 Cannabis sativa HOM05D010396 ORTHO05D002765 2.6e-69 266.2 156 91.7
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-46 188.0 177 63.3
CANSAT25G0180 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-41 171.8 186 59.7
CANSAT01G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-37 161.0 102 93.1
CANSAT35G0692 Cannabis sativa HOM05D010396 ORTHO05D002765 1.0e-30 137.9 186 43.0
CANSAT01G2097 Cannabis sativa HOM05D010396 ORTHO05D002765 9.2e-27 124.8 108 50.9
CANSAT11G2236 Cannabis sativa HOM05D010396 ORTHO05D002765 9.2e-27 124.8 108 50.9
CANSAT35G0400 Cannabis sativa HOM05D010396 ORTHO05D002765 9.2e-27 124.8 108 50.9
CANSAT21G1820 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-26 124.4 108 50.9
CANSAT21G2439 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-26 124.4 198 37.4
CANSAT35G0346 Cannabis sativa HOM05D010396 ORTHO05D002765 1.2e-26 124.4 108 50.9
CANSAT25G2859 Cannabis sativa HOM05D010396 ORTHO05D002765 1.6e-26 124.0 108 51.9
CANSAT80G0794 Cannabis sativa HOM05D010396 ORTHO05D002765 2.0e-26 123.6 108 50.9
CANSAT25G1832 Cannabis sativa HOM05D010396 ORTHO05D002765 2.7e-26 123.2 108 50.0
CANSAT54G0083 Cannabis sativa HOM05D010396 ORTHO05D000013 4.6e-26 122.5 204 38.2
CANSAT64G1880 Cannabis sativa HOM05D010396 ORTHO05D002765 4.6e-26 122.5 108 50.9
CANSAT64G1249 Cannabis sativa HOM05D010396 ORTHO05D002765 8.6e-25 118.2 103 51.5
CANSAT78G1392 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-22 109.8 186 41.4
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-19 100.9 118 39.0
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 4.6e-18 95.9 116 37.9
CANSAT25G3326 Cannabis sativa HOM05D000017 ORTHO05D002765 6.0e-18 95.5 43 100.0
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-16 89.0 117 32.5
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 7.3e-16 88.6 62 75.8
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 9.5e-16 88.2 93 39.8
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-15 87.8 199 29.6
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.6e-15 87.4 128 35.9
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 2.1e-15 87.0 117 31.6
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.7e-15 85.9 184 28.3
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 8.1e-15 85.1 98 41.8
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-14 84.3 122 35.2
CANSAT21G0038 Cannabis sativa HOM05D008401 ORTHO05D002765 1.8e-14 84.0 62 79.0
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.3e-14 83.6 105 36.2
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.1e-14 83.2 118 33.9
CANSAT21G1471 Cannabis sativa HOM05D000017 ORTHO05D000013 4.0e-14 82.8 122 34.4
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.2e-14 82.4 128 34.4
CANSAT11G0986 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-14 82.0 62 71.0
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 8.9e-14 81.6 95 37.9
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-13 81.3 118 33.1
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-13 80.9 97 36.1
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.5e-13 80.9 118 32.2
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-13 80.5 106 34.9
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-13 80.5 94 33.0
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-13 80.1 206 27.2
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-13 79.7 122 33.6
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-13 79.7 204 25.5
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-13 79.7 97 37.1
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-13 79.3 122 34.4
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-13 79.3 94 33.0
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.4e-13 79.3 117 36.8
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-13 79.3 94 33.0
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-13 79.3 128 29.7
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 4.4e-13 79.3 120 33.3
CANSAT54G1694 Cannabis sativa HOM05D000017 ORTHO05D000013 7.5e-13 78.6 106 34.0
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-12 77.8 94 31.9
Oeu063037.1 Olea europaea HOM05D012404 ORTHO05D002765 1.3e-12 77.8 98 33.7
SGA_v2.0_scaffold220G42613 Striga asiatica HOM05D015252 ORTHO05D002765 1.3e-12 77.8 99 36.4
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.7e-12 77.4 97 36.1
Oeu009472.1 Olea europaea HOM05D012404 ORTHO05D002765 1.7e-12 77.4 98 32.7
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-12 77.0 126 31.0
Oeu019782.1 Olea europaea HOM05D012404 ORTHO05D002765 2.2e-12 77.0 98 32.7
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-12 76.6 97 34.0
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.9e-12 76.6 102 34.3
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-12 76.6 97 35.1
CANSAT78G0171 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-12 76.3 97 35.1
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.7e-12 76.3 98 34.7
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.7e-12 76.3 94 31.9
Oeu059246.1 Olea europaea HOM05D012404 ORTHO05D002765 3.7e-12 76.3 98 33.7
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-12 75.9 97 34.0
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.9e-12 75.9 98 36.7
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-12 75.9 97 35.1
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.9e-12 75.9 97 34.0
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.4e-12 75.5 97 33.0
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.3e-12 75.1 97 34.0
Oeu002184.1 Olea europaea HOM05D012404 ORTHO05D002765 8.3e-12 75.1 98 33.7
Oeu009493.1 Olea europaea HOM05D012404 ORTHO05D002765 1.1e-11 74.7 98 32.7
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.4e-11 74.3 117 35.0
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-11 74.3 94 30.9
CANSAT56G3775 Cannabis sativa HOM05D000017 ORTHO05D002765 1.9e-11 73.9 35 91.4
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-11 73.9 94 34.0
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.9e-11 73.9 97 33.0
Oeu043717.1 Olea europaea HOM05D012404 ORTHO05D002765 1.9e-11 73.9 98 31.6
Oeu044344.1 Olea europaea HOM05D012404 ORTHO05D002765 1.9e-11 73.9 98 32.7
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-11 73.6 97 34.0
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-11 73.6 94 30.9
Oeu038186.1 Olea europaea HOM05D012404 ORTHO05D002765 2.4e-11 73.6 98 31.6
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 3.2e-11 73.2 92 37.0
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.1e-11 72.8 96 36.5
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.4e-11 72.4 126 28.6
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.4e-11 72.4 110 30.9
Oeu016698.1 Olea europaea HOM05D000017 ORTHO05D000013 5.4e-11 72.4 98 33.7
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-10 70.5 92 29.3
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.7e-10 70.1 97 35.1
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-10 70.1 97 33.0
Oeu053795.1 Olea europaea HOM05D012404 ORTHO05D002765 4.6e-10 69.3 98 30.6
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-09 67.8 97 30.9
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-09 67.4 78 34.6
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-09 67.4 97 32.0
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 1.7e-09 67.4 92 37.0
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-09 67.0 102 34.3
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-09 67.0 97 34.0
Oeu034871.1 Olea europaea HOM05D000017 ORTHO05D000013 3.0e-09 66.6 92 34.8
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.1e-09 65.9 97 32.0
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-08 64.7 245 24.5
CANSAT54G1096 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-08 64.3 246 24.4
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-08 64.3 94 27.7
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-08 64.3 130 29.2
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 1.5e-08 64.3 103 24.3
Nitab4.5_0000662g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-08 63.9 111 31.5
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-08 63.9 77 35.1
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-08 63.2 94 31.9
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-08 63.2 190 25.8
Nitab4.5_0001439g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.3e-08 62.8 117 29.9
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.3e-08 62.8 81 33.3
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-08 62.4 124 25.8
SGA_v2.0_scaffold17G08056 Striga asiatica HOM05D010396 ORTHO05D002765 5.6e-08 62.4 112 30.4
Nitab4.5_0001259g0140 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-07 61.2 114 29.8
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 61.2 181 23.8
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-07 61.2 105 31.4
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-07 61.2 95 28.4
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-07 61.2 95 28.4
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-07 60.8 92 31.5
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.1e-07 60.5 84 31.0
CANSAT25G1873 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-07 60.1 99 30.3
CANSAT54G1301 Cannabis sativa HOM05D012404 ORTHO05D002765 2.8e-07 60.1 99 30.3
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-07 60.1 99 30.3
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.8e-07 60.1 97 29.9
Nitab4.5_0003114g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-07 60.1 133 27.1
Nitab4.5_0017747g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.7e-07 59.3 115 26.1
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.7e-07 59.3 97 32.0
SGA_v2.0_scaffold308G48118 Striga asiatica HOM05D012404 ORTHO05D002765 4.7e-07 59.3 91 30.8
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.1e-07 58.5 84 33.3
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.1e-07 58.5 80 32.5
Nitab4.5_0002461g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.1e-06 58.2 129 26.4
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-06 58.2 97 32.0
Sopen06g002940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 58.2 99 27.3
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 1.1e-06 58.2 92 31.5
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.4e-06 57.8 86 32.6
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-06 57.8 68 36.8
Sopen02g001070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.8 99 27.3
Sopen02g032130 Solanum pennellii HOM05D000629 ORTHO05D000013 1.4e-06 57.8 99 27.3
Sopen03g024940 Solanum pennellii HOM05D006864 ORTHO05D002765 1.4e-06 57.8 99 27.3
Sopen12g019990 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-06 57.8 99 27.3
SGA_v2.0_scaffold122G33338 Striga asiatica HOM05D000196 ORTHO05D010161 1.4e-06 57.8 184 25.0
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-06 57.4 68 36.8
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.8e-06 57.4 121 26.4
SGA_v2.0_scaffold106G30719 Striga asiatica HOM05D015252 ORTHO05D002765 1.8e-06 57.4 85 30.6
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-06 57.0 97 32.0
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 2.4e-06 57.0 95 26.3
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.0e-06 56.2 195 24.1
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 4.0e-06 56.2 95 27.4
Sopen10g005080 Solanum pennellii HOM05D000017 ORTHO05D000013 5.2e-06 55.8 99 26.3
Nitab4.5_0005412g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.8e-06 55.5 80 28.8
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 6.8e-06 55.5 95 25.3
Sopen05g006380 Solanum pennellii HOM05D000017 ORTHO05D000013 8.9e-06 55.1 131 25.2
Sopen10g022230 Solanum pennellii HOM05D000017 ORTHO05D000013 8.9e-06 55.1 99 26.3


User provided reference genes

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