Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 1.1e-198 696.4 351 100.0
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.6e-147 525.8 349 78.2
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 4.5e-144 515.0 357 75.6
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 4.5e-144 515.0 365 74.5
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 4.5e-144 515.0 354 77.1
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 7.7e-144 514.2 350 76.9
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.0e-143 513.8 306 84.0
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 1.3e-143 513.5 353 75.1
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.7e-143 513.1 348 77.0
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 2.3e-143 512.7 363 74.1
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 5.0e-143 511.5 376 71.8
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 6.6e-143 511.1 361 74.8
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 6.6e-143 511.1 313 81.8
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 8.6e-143 510.8 350 74.6
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 8.6e-143 510.8 356 75.6
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 1.5e-142 510.0 333 78.1
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.5e-142 510.0 355 75.2
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 2.5e-142 509.2 356 76.1
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 5.5e-142 508.1 334 77.8
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 9.5e-142 507.3 340 77.9
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.2e-141 506.9 361 73.1
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 3.6e-141 505.4 305 83.0
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 4.7e-141 505.0 369 72.6
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 6.1e-141 504.6 337 76.0
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.4e-140 503.4 363 74.4
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 1.4e-140 503.4 337 76.3
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 1.4e-140 503.4 337 76.3
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 3.0e-140 502.3 353 74.8
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 6.8e-140 501.1 354 74.3
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.8e-140 501.1 313 81.8
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.2e-139 500.4 321 78.5
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 2.0e-139 499.6 364 72.3
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 2.6e-139 499.2 356 75.0
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 2.6e-139 499.2 360 72.8
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 3.4e-139 498.8 362 71.8
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 2.2e-138 496.1 311 80.4
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 2.2e-138 496.1 366 70.5
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 3.7e-138 495.4 303 81.8
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 4.9e-138 495.0 347 73.8
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 4.9e-138 495.0 353 73.4
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 9.2e-137 490.7 340 75.0
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.6e-136 490.0 320 78.8
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 2.7e-136 489.2 358 71.5
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 2.7e-136 489.2 357 72.3
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 3.5e-136 488.8 321 77.3
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 3.5e-136 488.8 362 71.0
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 1.7e-135 486.5 301 80.1
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.7e-135 486.5 359 69.4
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 3.9e-135 485.3 305 80.3
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 3.9e-135 485.3 363 70.8
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 8.6e-135 484.2 310 78.4
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 1.1e-134 483.8 301 79.7
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.1e-134 483.8 363 70.2
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 1.1e-134 483.8 318 75.5
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.5e-134 483.4 301 80.1
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 4.3e-134 481.9 352 70.7
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 7.3e-134 481.1 349 72.2
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 9.5e-134 480.7 353 71.1
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 2.1e-133 479.6 354 71.2
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.1e-133 479.6 311 79.1
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 2.8e-133 479.2 307 77.2
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 3.6e-133 478.8 349 72.5
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 4.7e-133 478.4 336 73.8
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.0e-132 477.2 353 71.1
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 1.0e-132 477.2 340 72.6
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.4e-132 476.9 342 73.1
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.4e-132 476.9 342 73.1
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.8e-132 476.5 307 78.2
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 5.2e-132 474.9 270 85.2
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 4.4e-131 471.9 417 64.3
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 2.2e-130 469.5 356 70.5
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 2.4e-129 466.1 346 69.7
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.2e-129 465.7 296 80.1
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 5.4e-129 464.9 348 70.7
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 2.3e-127 459.5 284 79.6
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.9e-126 456.4 313 73.8
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 2.5e-126 456.1 312 74.4
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 4.4e-123 445.3 356 67.4
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.1e-121 440.7 300 74.0
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 4.6e-120 435.3 453 54.7
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.6e-117 426.8 298 72.5
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.6e-117 425.6 311 68.8
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 2.6e-115 419.5 480 51.9
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 7.6e-115 417.9 300 71.0
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 9.9e-115 417.5 318 67.3
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 9.2e-113 411.0 346 64.2
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 3.0e-111 406.0 303 68.3
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 3.3e-110 402.5 452 52.2
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 7.6e-107 391.3 288 67.7
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.7e-103 380.2 213 87.8
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 5.1e-103 378.6 286 70.6
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 3.8e-98 362.5 305 61.0
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.4e-97 360.5 219 84.0
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 3.5e-88 329.3 199 83.4
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.9e-87 325.9 363 54.5
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.7e-82 310.5 317 53.6
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 1.9e-81 307.0 167 91.0
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 2.7e-80 303.1 164 90.9
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.8e-79 300.4 199 77.9
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.8e-79 300.4 238 68.1
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.8e-79 300.4 238 68.1
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 4.8e-77 292.4 356 50.3
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.4e-75 286.2 193 76.7
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.7e-74 283.9 190 76.8
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.8e-74 282.7 190 76.3
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.6e-72 277.3 166 83.1
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.3e-71 274.2 258 52.3
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.3e-70 269.2 148 87.8
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 2.9e-66 256.5 144 84.7
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.7e-62 242.3 259 49.4
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 5.3e-60 235.7 186 65.6
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.5e-59 232.6 211 59.2
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.1e-52 209.5 141 73.0
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.2e-43 181.4 108 83.3
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 8.3e-37 158.7 96 77.1
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 1.6e-32 144.4 108 65.7
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 6.1e-32 142.5 235 37.0
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 9.8e-30 135.2 80 85.0
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.8e-23 114.4 120 47.5
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.4e-22 110.2 258 31.8
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 2.8e-16 90.5 49 81.6
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.7e-10 71.2 47 74.5
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 3.6e-08 63.5 71 49.3


User provided reference genes

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