Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 3.2e-145 519.2 467 100.0
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 4.3e-81 306.2 264 62.5
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 2.6e-78 297.0 272 60.3
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 4.4e-78 296.2 268 60.4
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 1.4e-76 291.2 271 59.0
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 2.7e-75 287.0 272 58.8
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 4.6e-75 286.2 268 58.2
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 1.9e-73 280.8 267 58.4
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 2.5e-73 280.4 269 55.4
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 5.6e-73 279.3 264 58.0
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 2.8e-72 276.9 268 58.6
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 3.1e-71 273.5 264 58.0
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 8.9e-71 271.9 273 56.8
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 8.9e-71 271.9 276 54.7
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 1.5e-70 271.2 264 52.7
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 1.5e-70 271.2 269 57.6
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 2.0e-70 270.8 267 56.9
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 4.4e-70 269.6 274 56.2
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 5.8e-70 269.2 259 57.9
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 5.8e-70 269.2 263 57.8
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 7.5e-70 268.9 265 54.3
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 9.8e-70 268.5 270 57.0
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 9.8e-70 268.5 269 57.6
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 1.3e-69 268.1 274 53.6
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 1.3e-69 268.1 265 54.0
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 2.2e-69 267.3 267 52.4
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 2.2e-69 267.3 268 54.5
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 6.4e-69 265.8 269 53.5
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 1.4e-68 264.6 270 53.3
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 2.4e-68 263.8 267 56.6
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 7.1e-68 262.3 264 52.7
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 1.2e-67 261.5 277 54.9
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 2.7e-67 260.4 264 52.3
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 1.0e-66 258.5 264 51.9
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 1.0e-66 258.5 265 52.8
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 1.3e-66 258.1 264 51.9
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 3.9e-66 256.5 251 55.4
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 8.6e-66 255.4 251 55.8
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 4.3e-65 253.1 268 57.5
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 4.3e-65 253.1 269 54.3
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 7.3e-65 252.3 267 51.3
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 1.6e-64 251.1 202 61.4
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 2.8e-64 250.4 267 54.7
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 3.6e-64 250.0 266 50.4
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 5.2e-63 246.1 266 50.0
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 2.0e-62 244.2 274 53.6
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 3.4e-62 243.4 237 56.1
Prupe.7G178400 Prunus persica HOM05D007700 ORTHO05D009669 1.3e-61 241.5 266 52.3
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 2.4e-60 237.3 266 51.1
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 2.4e-60 237.3 270 50.0
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 7.1e-60 235.7 267 50.9
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 1.5e-57 228.0 268 48.5
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 9.6e-57 225.3 205 60.5
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 8.1e-56 222.2 152 73.7
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 4.9e-53 213.0 265 48.3
MD02G1120600 Malus domestica HOM05D007700 ORTHO05D009669 6.4e-53 212.6 265 46.0
Carub.0003s3177 Capsella rubella HOM05D007700 ORTHO05D009669 1.4e-52 211.5 234 49.1
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 4.2e-52 209.9 272 47.8
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 1.2e-51 208.4 278 47.1
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 3.3e-49 200.3 279 47.7
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 1.1e-47 195.3 234 50.0
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 1.4e-47 194.9 261 44.4
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 4.4e-46 189.9 146 65.1
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 8.4e-45 185.7 247 44.1
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 3.2e-44 183.7 246 47.2
FvH4_1g10671 Fragaria vesca HOM05D007700 ORTHO05D009669 4.6e-43 179.9 197 51.3
FAN23G0395 Fragaria x ananassa HOM05D007700 ORTHO05D009669 4.6e-43 179.9 196 51.0
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 1.0e-42 178.7 232 44.8
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 2.3e-42 177.6 151 60.9
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 3.9e-42 176.8 151 60.3
Lalb_Chr03g0039951 Lupinus albus HOM05D007700 ORTHO05D009669 5.1e-42 176.4 198 53.0
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 6.6e-42 176.0 238 45.8
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 1.9e-41 174.5 151 60.9
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 1.9e-41 174.5 278 41.7
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 3.3e-41 173.7 267 43.8
TWI73G0108 Tripterygium wilfordii HOM05D007700 ORTHO05D009669 2.6e-38 164.1 199 48.2
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 4.9e-37 159.8 226 46.9
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 8.7e-34 149.1 205 45.9
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 2.5e-33 147.5 204 44.1
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 9.6e-33 145.6 210 44.8
Aqoxy6G01792 Aquilegia oxysepala HOM05D007700 ORTHO05D009669 2.8e-32 144.1 214 42.5
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 3.1e-31 140.6 112 59.8
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 1.4e-28 131.7 202 42.1
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 4.2e-28 130.2 127 51.2
Actinidia17391 Actinidia chinensis HOM05D000192 ORTHO05D000123 8.7e-26 122.5 100 60.0
SHI08474 Sapria himalayana HOM05D007700 ORTHO05D009669 9.6e-25 119.0 105 55.2
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 1.4e-23 115.2 123 56.1
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 1.2e-22 112.1 266 35.3
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 1.3e-16 92.0 73 60.3
ATR0739G057 Amborella trichopoda HOM05D007700 ORTHO05D009669 9.0e-15 85.9 169 33.7
CAN.G1081.5 Capsicum annuum HOM05D000058 ORTHO05D000255 1.1e-07 62.4 105 33.3
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 5.3e-07 60.1 162 27.2
Rhsim02G0072100 Rhododendron simsii HOM05D007128 ORTHO05D009059 6.9e-07 59.7 139 29.5
Medtr1g039290 Medicago truncatula HOM05D010072 ORTHO05D011797 9.1e-07 59.3 181 29.8
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 1.2e-06 58.9 36 80.6
MBI12_g09300_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D008530 1.2e-06 58.9 123 29.3
Solyc04g076370.4 Solanum lycopersicum HOM05D007402 ORTHO05D003673 1.2e-06 58.9 104 30.8
Sopen04g030130 Solanum pennellii HOM05D007402 ORTHO05D003673 1.2e-06 58.9 104 30.8
PGSC0003DMG400009341 Solanum tuberosum HOM05D007402 ORTHO05D003673 1.2e-06 58.9 104 30.8
SalBow3G4038 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.5e-06 58.5 201 26.4
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 2.6e-06 57.8 36 80.6
Phvul.004G147700 Phaseolus vulgaris HOM05D004271 ORTHO05D006011 3.4e-06 57.4 178 24.7
VMungo0720G3091 Vigna mungo HOM05D000855 ORTHO05D008530 4.5e-06 57.0 122 29.5
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 5.9e-06 56.6 214 23.4
PSO017G6569 Papaver somniferum HOM05D007486 ORTHO05D003673 5.9e-06 56.6 114 29.8
PSO266G0010 Papaver somniferum HOM05D003900 ORTHO05D005009 5.9e-06 56.6 201 25.4
Peaxi162Scf00454g00034 Petunia axillaris HOM05D007402 ORTHO05D003673 5.9e-06 56.6 97 32.0
CARHR084060 Cardamine hirsuta HOM05D000855 ORTHO05D008530 7.7e-06 56.2 124 27.4


User provided reference genes

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