Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 3.1e-170 601.7 292 100.0
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 8.4e-152 540.4 289 88.9
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 1.6e-150 536.2 289 88.9
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 1.6e-150 536.2 289 88.9
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 2.1e-150 535.8 289 87.2
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 7.9e-150 533.9 289 88.2
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 7.9e-150 533.9 289 88.2
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 1.3e-149 533.1 289 87.9
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 5.1e-149 531.2 289 86.9
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 5.1e-149 531.2 285 88.4
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 8.7e-149 530.4 289 88.9
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 1.1e-148 530.0 289 86.2
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 1.9e-148 529.3 289 87.9
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 1.9e-148 529.3 285 88.1
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 2.5e-148 528.9 289 86.2
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 4.3e-148 528.1 289 85.5
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 5.6e-148 527.7 285 88.1
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 7.4e-148 527.3 289 86.9
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 9.6e-148 526.9 290 86.6
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 9.6e-148 526.9 290 86.6
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 9.6e-148 526.9 289 87.2
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 9.6e-148 526.9 289 86.5
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 2.1e-147 525.8 288 86.1
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 2.1e-147 525.8 286 86.4
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 4.8e-147 524.6 286 86.0
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 2.4e-146 522.3 288 84.7
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 3.1e-146 521.9 289 86.2
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 3.1e-146 521.9 289 85.1
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 3.1e-146 521.9 289 86.5
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 4.0e-146 521.5 289 87.5
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 4.0e-146 521.5 289 86.9
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 5.3e-146 521.2 289 84.1
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 5.3e-146 521.2 289 86.9
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 6.9e-146 520.8 286 85.7
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 9.0e-146 520.4 289 85.5
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.2e-145 520.0 289 85.8
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 1.2e-145 520.0 289 85.8
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 1.5e-145 519.6 289 84.4
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 2.0e-145 519.2 289 85.5
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 2.6e-145 518.8 289 84.8
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 4.5e-145 518.1 289 83.4
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.5e-145 518.1 289 85.8
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.5e-145 518.1 289 85.1
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 5.8e-145 517.7 289 85.1
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 5.8e-145 517.7 289 86.2
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 9.9e-145 516.9 289 85.1
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 1.3e-144 516.5 289 83.0
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 1.3e-144 516.5 289 83.0
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 1.3e-144 516.5 320 79.1
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 1.3e-144 516.5 289 84.1
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 1.7e-144 516.2 289 84.1
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 2.9e-144 515.4 289 84.1
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 2.9e-144 515.4 289 84.8
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.9e-144 515.4 289 83.7
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 3.8e-144 515.0 289 82.7
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.9e-144 514.6 289 85.5
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 4.9e-144 514.6 286 83.6
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 8.4e-144 513.8 289 82.4
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 1.1e-143 513.5 289 82.4
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 1.1e-143 513.5 289 83.0
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.1e-143 513.5 286 84.6
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 4.2e-143 511.5 289 82.4
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 7.1e-143 510.8 289 83.7
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 1.2e-142 510.0 289 83.7
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 1.6e-142 509.6 280 85.0
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 2.1e-142 509.2 289 82.4
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 2.7e-142 508.8 289 82.0
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 4.6e-142 508.1 290 83.4
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 7.9e-142 507.3 291 83.2
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 1.3e-141 506.5 289 81.7
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 1.8e-141 506.1 289 81.7
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 2.3e-141 505.8 289 81.3
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 2.3e-141 505.8 289 81.3
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 3.0e-141 505.4 289 82.7
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 5.1e-141 504.6 286 84.3
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 6.7e-141 504.2 289 81.3
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 8.7e-141 503.8 289 82.4
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 1.9e-140 502.7 290 83.1
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.3e-139 500.0 287 80.8
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 1.3e-139 500.0 288 80.6
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 1.3e-139 500.0 288 80.6
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 1.6e-139 499.6 289 80.3
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 1.6e-139 499.6 289 82.4
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 2.1e-139 499.2 270 88.9
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 4.8e-139 498.0 289 81.0
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 6.2e-139 497.7 289 81.3
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 6.2e-139 497.7 289 81.7
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 6.2e-139 497.7 289 81.7
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 1.8e-138 496.1 289 81.0
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 3.1e-138 495.4 292 79.5
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 9.0e-138 493.8 287 80.5
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 2.6e-137 492.3 270 87.4
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 5.8e-137 491.1 290 79.3
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 1.7e-136 489.6 289 81.7
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 2.2e-136 489.2 271 86.0
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 2.9e-136 488.8 292 79.5
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 1.4e-135 486.5 289 81.3
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.5e-135 485.7 289 79.9
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 9.3e-135 483.8 273 85.3
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 4.6e-134 481.5 291 77.7
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 4.6e-134 481.5 288 76.4
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 5.1e-133 478.0 288 80.2
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.8e-130 469.5 289 75.8
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 3.4e-129 465.3 289 78.5
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 1.3e-128 463.4 310 74.8
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 1.1e-127 460.3 270 80.7
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.9e-127 459.5 251 84.9
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 7.9e-126 454.1 289 76.5
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 3.0e-125 452.2 312 70.2
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 1.3e-123 446.8 287 71.4
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 1.6e-123 446.4 289 75.1
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 2.8e-123 445.7 287 72.5
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 3.2e-119 432.2 273 76.9
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.3e-117 426.0 281 69.8
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.5e-113 413.3 266 72.2
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.0e-112 410.6 270 70.0
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 4.7e-110 401.7 283 65.4
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 2.3e-101 372.9 221 78.7
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 3.2e-95 352.4 322 59.6
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 6.5e-88 328.2 186 84.9
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.5e-84 317.0 292 52.4
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 1.5e-84 317.0 187 79.1
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 8.3e-83 311.2 180 82.2
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 7.7e-81 304.7 170 85.3
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 1.4e-77 293.9 290 52.1
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 2.3e-77 293.1 295 51.2
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 9.8e-76 287.7 188 71.3
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 1.9e-71 273.5 294 45.6
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 6.0e-57 225.3 310 43.2
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 3.0e-56 223.0 164 68.9
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.1e-53 213.0 221 53.4
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.3e-51 207.6 221 52.5
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 5.2e-45 185.7 106 80.2
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.9e-43 179.9 98 85.7
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.9e-43 179.1 99 83.8
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 7.8e-41 171.8 93 86.0
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 2.4e-29 133.7 75 85.3
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 4.8e-22 109.4 166 39.8
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 4.8e-22 109.4 93 62.4
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.0e-08 65.1 51 56.9
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 1.8e-08 64.3 39 82.1


User provided reference genes

Program Settings