Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 1.1e-92 343.2 168 100.0
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 5.9e-49 198.0 130 78.5
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 1.0e-48 197.2 130 76.9
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 2.2e-48 196.1 130 76.2
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 2.7e-46 189.1 130 75.4
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 5.5e-39 164.9 127 63.0
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 5.3e-34 148.3 124 58.1
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 9.1e-34 147.5 117 60.7
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-33 146.0 124 57.3
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 5.9e-33 144.8 125 57.6
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 5.9e-33 144.8 124 56.5
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 7.7e-33 144.4 124 58.9
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.0e-32 144.1 122 59.8
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.0e-32 144.1 122 59.8
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.0e-32 144.1 122 59.8
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.2e-32 142.9 122 60.7
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 4.2e-31 138.7 122 54.1
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 7.2e-31 137.9 126 56.3
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-30 137.1 125 53.6
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-30 136.7 117 54.7
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 2.1e-30 136.3 117 55.6
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 6.1e-30 134.8 131 53.4
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 6.1e-30 134.8 131 54.2
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 2.3e-29 132.9 125 52.8
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 2.3e-29 132.9 124 54.0
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.3e-29 132.9 126 57.9
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 3.0e-29 132.5 125 56.0
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 6.8e-29 131.3 125 52.0
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.2e-28 130.6 123 58.5
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-28 129.4 131 49.6
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 3.4e-28 129.0 116 53.4
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 5.7e-28 128.3 124 54.0
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 5.7e-28 128.3 116 56.9
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 7.5e-28 127.9 131 51.9
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 7.5e-28 127.9 122 54.9
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.8e-27 125.9 124 58.9
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 7.0e-26 121.3 117 52.1
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 7.0e-26 121.3 125 48.0
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-25 120.6 119 51.3
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 1.6e-25 120.2 122 46.7
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 3.5e-25 119.0 125 48.8
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 3.5e-25 119.0 125 48.8
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 4.5e-25 118.6 117 53.0
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 3.8e-24 115.5 123 49.6
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 5.0e-24 115.2 128 45.3
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 6.5e-24 114.8 118 53.4
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 6.5e-24 114.8 125 49.6
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 8.5e-24 114.4 126 49.2
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 8.5e-24 114.4 126 49.2
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 1.1e-23 114.0 126 48.4
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 1.1e-23 114.0 126 48.4
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 1.9e-23 113.2 125 52.0
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 2.5e-23 112.8 125 52.8
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 4.2e-23 112.1 97 55.7
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 4.2e-23 112.1 128 47.7
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 7.2e-23 111.3 125 51.2
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.2e-22 110.5 116 48.3
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 4.7e-22 108.6 93 55.9
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 8.0e-22 107.8 125 49.6
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 8.0e-22 107.8 125 49.6
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 8.0e-22 107.8 128 50.8
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 8.0e-22 107.8 125 49.6
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 8.0e-22 107.8 93 59.1
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.0e-21 107.5 125 52.0
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.3e-21 106.3 125 49.6
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 2.3e-21 106.3 117 51.3
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 3.0e-21 105.9 125 42.4
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 8.8e-21 104.4 125 45.6
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-20 104.0 120 47.5
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-20 104.0 89 60.7
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 2.0e-20 103.2 126 45.2
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 9.8e-20 100.9 128 41.4
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.3e-19 100.5 127 43.3
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-18 97.4 113 47.8
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-18 97.4 95 52.6
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.1e-18 97.4 133 41.4
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 5.4e-18 95.1 135 41.5
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 3.8e-16 89.0 149 37.6
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 3.8e-16 89.0 149 37.6
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 5.0e-16 88.6 136 41.2
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.5e-15 86.3 82 58.5
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 5.6e-15 85.1 124 40.3
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 5.6e-15 85.1 131 40.5
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 5.6e-15 85.1 141 34.8
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-14 84.0 103 44.7
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 1.6e-14 83.6 141 34.0
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 2.8e-14 82.8 125 40.8
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 4.7e-14 82.0 138 37.0
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-12 77.4 65 53.8
SalBow1G0974 Salvia bowleyana HOM05D007540 ORTHO05D009531 9.8e-12 74.3 59 61.0
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 4.9e-11 72.0 127 37.0
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 5.4e-10 68.6 57 57.9
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.2e-09 67.4 58 56.9
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 8.6e-08 61.2 57 54.4
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 1.5e-07 60.5 110 30.9
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 9.5e-07 57.8 33 75.8
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 8.0e-06 54.7 58 43.1


User provided reference genes

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