Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.6e-91 339.3 169 100.0
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 6.5e-56 221.1 153 70.6
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 4.2e-55 218.4 153 69.9
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 2.7e-54 215.7 156 68.6
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 2.7e-54 215.7 153 68.6
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 2.7e-54 215.7 153 68.6
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 6.1e-54 214.5 153 68.0
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.8e-53 213.0 154 68.2
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.2e-52 210.3 155 66.5
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 1.5e-52 209.9 153 67.3
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 1.5e-52 209.9 154 66.2
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 1.5e-52 209.9 153 66.7
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 2.0e-52 209.5 153 65.4
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 3.3e-52 208.8 152 65.1
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 3.3e-52 208.8 154 66.2
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.7e-52 208.0 153 66.7
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.7e-52 208.0 153 66.7
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 5.7e-52 208.0 154 67.5
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 7.5e-52 207.6 154 65.6
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 7.5e-52 207.6 153 66.7
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 7.5e-52 207.6 155 68.4
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 9.7e-52 207.2 159 64.8
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 1.3e-51 206.8 157 62.4
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 2.8e-51 205.7 153 66.7
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 3.7e-51 205.3 154 64.3
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 4.8e-51 204.9 153 62.7
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 4.8e-51 204.9 161 62.7
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 6.3e-51 204.5 160 63.1
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 8.3e-51 204.1 153 68.0
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 8.3e-51 204.1 166 62.0
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 8.3e-51 204.1 153 65.4
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 1.1e-50 203.8 153 67.3
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.1e-50 203.8 153 63.4
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 1.8e-50 203.0 154 64.3
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 1.8e-50 203.0 153 66.0
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.8e-50 203.0 154 66.2
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 1.8e-50 203.0 157 64.3
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.8e-50 203.0 153 64.1
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.8e-50 203.0 153 64.1
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 2.4e-50 202.6 154 64.9
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 2.4e-50 202.6 164 61.0
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 3.1e-50 202.2 153 68.0
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 3.1e-50 202.2 153 66.7
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 3.1e-50 202.2 153 64.7
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 4.1e-50 201.8 168 61.3
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 7.0e-50 201.1 153 65.4
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 1.2e-49 200.3 154 63.0
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 1.6e-49 199.9 153 66.0
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 1.6e-49 199.9 153 63.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 1.6e-49 199.9 164 61.0
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 2.0e-49 199.5 153 63.4
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 2.0e-49 199.5 153 63.4
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 2.0e-49 199.5 153 64.1
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 2.0e-49 199.5 152 61.8
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 3.5e-49 198.7 150 66.0
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 3.5e-49 198.7 152 64.5
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.5e-49 198.7 156 62.8
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 4.5e-49 198.4 152 61.2
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 5.9e-49 198.0 158 64.6
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 5.9e-49 198.0 150 66.0
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 7.7e-49 197.6 153 63.4
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 7.7e-49 197.6 153 60.8
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 7.7e-49 197.6 153 60.8
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 1.0e-48 197.2 152 63.8
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 1.0e-48 197.2 155 63.2
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 1.0e-48 197.2 153 62.7
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 1.7e-48 196.4 153 62.1
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 1.7e-48 196.4 153 64.1
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 2.2e-48 196.1 153 64.1
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 2.9e-48 195.7 157 64.3
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.9e-48 195.7 152 60.5
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 2.9e-48 195.7 152 59.2
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 3.8e-48 195.3 153 62.1
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.1e-47 193.7 153 62.1
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.1e-47 193.7 155 60.6
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.5e-47 193.4 153 62.7
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.9e-47 193.0 153 60.8
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 1.9e-47 193.0 153 61.4
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 3.2e-47 192.2 153 64.7
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 5.5e-47 191.4 153 58.2
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 9.4e-47 190.7 153 58.2
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 9.4e-47 190.7 157 55.4
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 1.6e-46 189.9 159 59.7
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 1.6e-46 189.9 157 54.8
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 3.6e-46 188.7 152 61.2
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 4.7e-46 188.3 149 62.4
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 1.0e-45 187.2 158 58.9
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 5.2e-45 184.9 153 56.9
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 5.2e-45 184.9 152 58.6
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 5.2e-45 184.9 155 59.4
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.5e-44 183.3 173 53.8
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.5e-44 183.3 165 55.8
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 2.6e-44 182.6 156 59.6
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 4.4e-44 181.8 156 59.6
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.3e-43 180.3 158 56.3
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.3e-43 180.3 158 56.3
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 2.2e-43 179.5 178 54.5
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 6.3e-43 177.9 153 58.8
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 5.0e-40 168.3 168 53.0
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 6.1e-38 161.4 157 51.0
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 3.4e-36 155.6 146 52.1
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 2.2e-35 152.9 151 50.3
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 3.7e-35 152.1 101 68.3
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.6e-30 136.7 130 56.2
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 4.9e-27 125.2 152 46.7
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 2.4e-26 122.9 157 45.2
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 3.5e-25 119.0 106 52.8
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.8e-21 106.7 162 39.5
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.3e-21 106.3 156 40.4
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 4.4e-20 102.1 138 41.3
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 4.9e-19 98.6 143 40.6
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 6.6e-16 88.2 137 40.9
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 2.5e-15 86.3 57 61.4
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 1.3e-08 63.9 39 69.2
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.2e-06 57.4 53 62.3


User provided reference genes

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