Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 0.0e+00 1239.2 657 100.0
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 0.0e+00 1221.8 657 98.6
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 1.4e-218 763.5 655 64.6
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 9.8e-217 757.3 648 64.8
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 5.4e-215 751.5 653 63.4
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 5.4e-215 751.5 653 64.3
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 3.5e-214 748.8 653 64.3
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 1.9e-212 743.0 656 63.0
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.0e-205 720.7 655 62.1
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.9e-204 716.5 653 60.8
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 5.6e-204 714.9 649 61.8
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 5.6e-204 714.9 650 61.1
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 9.5e-204 714.1 632 62.7
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.2e-203 713.8 633 63.7
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 3.6e-203 712.2 654 61.5
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 2.0e-201 706.4 649 61.6
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 4.4e-201 705.3 686 59.2
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 9.9e-201 704.1 655 61.2
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 4.9e-200 701.8 655 60.8
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 4.1e-199 698.7 660 59.5
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 6.0e-198 694.9 660 59.2
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 4.7e-195 685.3 713 56.4
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 2.0e-193 679.9 653 59.9
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 2.0e-193 679.9 676 57.5
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 4.9e-192 675.2 657 59.1
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 6.4e-192 674.9 647 60.0
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 8.4e-192 674.5 640 60.6
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 2.4e-191 672.9 656 59.1
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 9.3e-191 671.0 653 57.6
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 1.6e-190 670.2 642 59.8
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 3.5e-190 669.1 648 59.1
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 7.3e-188 661.4 635 59.4
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 1.3e-187 660.6 681 56.5
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.3e-187 660.6 643 59.3
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.6e-187 660.2 681 56.5
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 4.8e-187 658.7 619 59.5
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 1.5e-185 653.7 642 59.2
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 1.7e-184 650.2 664 57.1
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 3.2e-183 646.0 646 58.4
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.3e-181 639.8 641 58.5
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.1e-180 637.5 795 49.7
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 2.8e-179 632.9 649 56.2
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.5e-177 627.1 673 56.2
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.7e-176 623.6 663 55.7
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 1.4e-175 620.5 653 55.4
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 7.1e-175 618.2 653 56.0
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 2.1e-174 616.7 653 55.3
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 6.0e-174 615.1 524 62.4
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 5.1e-173 612.1 663 54.3
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 9.6e-172 607.8 635 55.0
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 4.8e-171 605.5 644 55.4
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 9.0e-170 601.3 644 55.0
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 2.1e-166 590.1 650 52.9
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 3.5e-166 589.3 639 54.6
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.3e-163 580.9 681 53.5
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 4.8e-163 578.9 598 56.5
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 6.3e-163 578.6 670 52.4
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.2e-161 574.3 600 55.8
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 1.2e-161 574.3 648 51.4
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 2.6e-161 573.2 650 52.5
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 7.6e-161 571.6 631 54.4
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 3.8e-160 569.3 757 48.0
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 6.5e-160 568.5 648 50.8
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 2.5e-159 566.6 644 50.8
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 3.6e-158 562.8 648 50.5
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 1.1e-156 557.8 648 50.2
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 4.8e-155 552.4 675 48.6
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 2.4e-154 550.1 676 48.8
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.5e-153 547.4 644 50.0
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 3.4e-153 546.2 676 48.8
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 2.2e-152 543.5 701 47.6
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.4e-151 540.8 676 48.4
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.9e-151 540.4 686 48.5
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.0e-149 534.6 659 50.4
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 2.0e-148 530.4 517 57.6
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 9.7e-148 528.1 701 46.8
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 1.4e-146 524.2 661 50.4
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 5.3e-146 522.3 650 48.8
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 1.4e-141 507.7 656 47.7
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.3e-139 501.1 450 63.1
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 6.3e-139 498.8 450 61.1
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.8e-138 497.3 632 49.5
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.1e-138 496.5 668 46.4
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.8e-133 480.7 474 59.3
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 1.2e-132 478.0 661 44.6
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.2e-127 459.5 421 59.4
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 4.2e-127 459.5 601 47.6
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 4.5e-121 439.5 663 42.2
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.7e-120 437.6 705 40.7
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 4.7e-118 429.5 488 52.5
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.5e-116 424.5 660 44.8
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 3.4e-116 423.3 525 49.7
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 7.8e-113 412.1 654 41.3
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.2e-110 404.8 503 50.3
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 2.8e-110 403.7 673 39.4
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.3e-109 400.6 423 57.2
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 1.4e-106 391.3 462 52.6
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 1.6e-105 387.9 652 40.2
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 5.0e-104 382.9 649 39.9
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.1e-101 375.2 661 38.7
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 3.2e-98 363.6 501 44.9
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 7.1e-82 309.3 841 32.5
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.5e-71 274.2 216 65.3
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.1e-70 271.2 286 58.7
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 2.1e-70 271.2 505 37.2
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 6.2e-62 243.0 338 49.1
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 2.4e-61 241.1 272 57.7
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 4.0e-61 240.4 165 75.8
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 8.2e-54 216.1 811 27.5
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 6.9e-53 213.0 216 55.6
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 5.8e-52 209.9 752 28.2
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 5.8e-52 209.9 153 70.6
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.3e-47 194.1 150 69.3
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.5e-39 167.9 218 45.4
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 3.4e-36 157.5 176 54.0
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 3.2e-34 151.0 315 38.7
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.7e-27 128.6 101 66.3
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 1.6e-25 122.1 187 39.0
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.9e-20 103.6 94 64.9
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 1.0e-19 102.8 78 65.4
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.7e-19 102.1 91 64.8
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.2e-19 101.7 90 68.9
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.4e-15 87.4 97 51.5
Sc18g0007390 Simmondsia chinensis HOM05D006229 ORTHO05D007190 3.7e-14 84.3 100 45.0
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.3e-11 75.9 52 67.3
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 9.4e-10 69.7 47 72.3
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 4.0e-08 64.3 93 39.8
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 9.8e-07 59.7 50 64.0
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 1.3e-06 59.3 125 38.4
CSS0040212 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D007190 4.8e-06 57.4 41 75.6
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.3e-06 57.0 43 74.4


User provided reference genes

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