Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 0.0e+00 1272.3 673 100.0
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 1.5e-103 381.3 773 42.6
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 1.7e-91 341.3 766 39.7
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 3.8e-91 340.1 737 39.3
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.4e-88 331.6 727 38.9
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.6e-84 318.2 784 36.9
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.0e-84 317.8 766 37.7
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.5e-74 285.0 742 36.8
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 3.6e-73 280.4 799 32.7
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 8.9e-72 275.8 802 32.9
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.7e-70 271.6 774 36.6
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 1.6e-68 265.0 771 35.5
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 6.0e-68 263.1 778 34.2
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.9e-67 260.4 686 36.4
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 2.5e-66 257.7 772 34.7
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.6e-65 255.0 813 33.7
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.1e-64 252.3 601 39.8
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.3e-64 251.1 759 35.3
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 5.2e-64 250.0 791 34.6
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.8e-63 246.5 801 34.1
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 4.1e-61 240.4 696 34.6
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 2.7e-60 237.7 708 34.0
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.5e-60 237.3 781 33.7
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 3.9e-59 233.8 649 36.2
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 8.1e-57 226.1 721 35.1
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.6e-55 221.1 740 31.9
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.2e-54 218.0 794 34.5
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 3.8e-54 217.2 801 32.1
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 4.9e-54 216.9 549 36.8
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 5.4e-53 213.4 668 35.9
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.9e-50 204.9 743 31.9
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 2.5e-50 204.5 703 33.3
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.3e-46 192.2 711 32.8
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 9.3e-45 186.0 685 33.3
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.3e-43 181.4 781 30.2
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 2.5e-42 177.9 766 30.5
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 6.2e-41 173.3 754 30.5
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 1.1e-40 172.6 692 31.9
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 1.1e-40 172.6 649 30.0
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 7.1e-37 159.8 672 31.2
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.7e-36 157.9 665 31.7
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 4.6e-36 157.1 658 31.2
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 3.0e-35 154.5 675 31.3
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.9e-35 154.1 666 30.2
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.1e-34 152.5 601 30.8
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.1e-34 152.5 710 30.0
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.1e-34 152.5 682 30.9
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 1.9e-34 151.8 671 32.8
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 9.6e-34 149.4 682 29.9
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 1.6e-33 148.7 295 41.4
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.1e-33 148.3 647 29.7
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 6.9e-32 143.3 691 29.2
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 6.9e-32 143.3 528 33.0
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 5.8e-31 140.2 731 29.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.3e-30 139.0 637 30.6
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 2.2e-30 138.3 706 29.7
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 6.4e-30 136.7 316 39.6
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.4e-29 135.6 625 31.5
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 9.3e-29 132.9 672 30.4
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.6e-28 132.1 635 29.8
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 7.9e-28 129.8 709 29.9
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.0e-27 129.4 666 29.3
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.0e-27 129.4 667 28.5
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 3.9e-27 127.5 700 28.0
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.5e-26 125.6 668 28.6
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 1.9e-26 125.2 667 28.6
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 3.3e-26 124.4 664 27.4
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 4.3e-26 124.0 666 28.1
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 7.4e-26 123.2 589 29.2
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 1.3e-25 122.5 685 27.6
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.6e-25 122.1 286 38.5
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 2.1e-25 121.7 625 29.9
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 2.1e-25 121.7 622 28.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 3.7e-25 120.9 712 27.2
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 6.2e-25 120.2 709 27.2
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 1.2e-23 115.9 656 25.9
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 1.3e-22 112.5 647 26.6
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 2.2e-22 111.7 694 28.2
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 2.2e-22 111.7 508 28.5
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 8.4e-22 109.8 665 26.6
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 8.4e-22 109.8 366 32.8
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.6e-20 105.5 675 25.9
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.6e-20 105.5 570 31.9
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 2.7e-20 104.8 704 28.0
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 3.9e-19 100.9 693 26.3
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 6.7e-19 100.1 421 30.4
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 6.7e-19 100.1 209 39.7
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 4.3e-18 97.4 694 25.1
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.3e-17 95.9 667 25.6
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 4.8e-17 94.0 645 26.8
BraA02t07054Z Brassica rapa HOM05D010473 ORTHO05D007577 1.4e-16 92.4 653 26.2
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 3.1e-16 91.3 563 29.0
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 2.0e-15 88.6 697 24.7
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.6e-15 88.2 677 26.3
BcaC03g15618 Brassica carinata HOM05D010473 ORTHO05D007577 3.4e-15 87.8 681 27.2
C02p33740 Brassica napus HOM05D010473 ORTHO05D007577 4.5e-15 87.4 682 26.8
A02p20200 Brassica napus HOM05D010473 ORTHO05D007577 5.9e-15 87.0 656 25.3
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.0e-14 86.3 391 29.2
BolC2t09331H Brassica oleracea HOM05D010473 ORTHO05D007577 3.8e-14 84.3 647 27.0
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 5.5e-13 80.5 553 25.7
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 7.2e-13 80.1 645 25.0
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 9.3e-13 79.7 617 26.6
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 1.0e-11 76.3 547 26.9
Lj4A25T50 Lonicera japonica HOM05D007378 ORTHO05D007577 1.3e-11 75.9 169 38.5
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 3.3e-10 71.2 630 24.9
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 1.3e-09 69.3 386 27.5
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 4.8e-09 67.4 581 22.5
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 8.2e-09 66.6 668 23.7
C06p49680 Brassica napus HOM05D010473 ORTHO05D007577 8.2e-09 66.6 612 26.1
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 3.1e-08 64.7 461 28.4
BolC6t40007H Brassica oleracea HOM05D010473 ORTHO05D007577 9.1e-08 63.2 623 24.7
BcaC08g47058 Brassica carinata HOM05D010473 ORTHO05D007577 1.0e-06 59.7 246 35.4
BcaC03g15614 Brassica carinata HOM05D010473 ORTHO05D007577 1.7e-06 58.9 312 27.9
TAR381G0505 Trochodendron aralioides HOM05D007378 ORTHO05D007577 2.2e-06 58.5 102 49.0
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 8.5e-06 56.6 112 39.3


User provided reference genes

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