Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3188 Cannabis sativa HOM05D001921 ORTHO05D001784 1.4e-90 336.3 172 100.0
RcHm_v2.0_Chr6g0297171 Rosa chinensis HOM05D014836 ORTHO05D001784 1.7e-19 100.1 177 42.4
Prupe.1G486800 Prunus persica HOM05D001921 ORTHO05D001784 2.6e-15 86.3 174 39.1
Prupe.1G486700 Prunus persica HOM05D001921 ORTHO05D001784 2.4e-13 79.7 177 36.7
CiPaw.08G008000 Carya illinoinensis HOM05D001921 ORTHO05D001784 2.6e-12 76.3 172 36.6
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 3.4e-12 75.9 172 37.2
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 4.5e-12 75.5 170 38.2
MD15G1131400 Malus domestica HOM05D001921 ORTHO05D001784 4.5e-12 75.5 190 33.7
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.3e-11 73.9 170 37.6
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.7e-11 73.6 170 37.6
Gohir.A07G030700 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.9e-11 72.8 172 36.0
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 2.9e-11 72.8 175 37.1
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 3.8e-11 72.4 169 36.7
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 3.8e-11 72.4 167 37.7
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 5.0e-11 72.0 163 35.0
CiPaw.07G227300 Carya illinoinensis HOM05D001921 ORTHO05D001784 8.5e-11 71.2 163 37.4
COL.COLO4_18922 Corchorus olitorius HOM05D001921 ORTHO05D001784 8.5e-11 71.2 177 35.6
C07p59050 Brassica napus HOM05D001921 ORTHO05D001784 1.4e-10 70.5 179 32.4
Thhalv10026353m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 2.5e-10 69.7 184 34.8
Gorai.001G036300 Gossypium raimondii HOM05D001921 ORTHO05D001784 2.5e-10 69.7 172 36.0
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 5.5e-10 68.6 172 38.4
CARHR239920 Cardamine hirsuta HOM05D001921 ORTHO05D001784 1.2e-09 67.4 188 34.6
Gohir.D07G034600 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.2e-09 67.4 172 36.0
Dinv42904 Davidia involucrata HOM05D001921 ORTHO05D001784 1.6e-09 67.0 165 35.8
Dinv43197 Davidia involucrata HOM05D001921 ORTHO05D001784 1.6e-09 67.0 165 35.8
A03p61190 Brassica napus HOM05D001921 ORTHO05D001784 2.1e-09 66.6 178 31.5
BraA03t15157Z Brassica rapa HOM05D001921 ORTHO05D001784 4.7e-09 65.5 177 31.1
Dinv41418 Davidia involucrata HOM05D001921 ORTHO05D001784 4.7e-09 65.5 162 35.2
BolC7t46353H Brassica oleracea HOM05D001921 ORTHO05D001784 6.1e-09 65.1 182 33.0
Carub.0007s0853 Capsella rubella HOM05D001921 ORTHO05D001784 6.1e-09 65.1 192 32.3
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 6.1e-09 65.1 180 37.8
Potri.018G022400 Populus trichocarpa HOM05D001921 ORTHO05D001784 8.0e-09 64.7 174 33.9
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 1.4e-08 63.9 146 37.0
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 1.8e-08 63.5 169 36.7
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.3e-08 63.2 176 36.9
Cfa013096 Carpinus fangiana HOM05D001921 ORTHO05D001784 5.2e-08 62.0 164 34.8
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 5.2e-08 62.0 169 37.9
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 6.7e-08 61.6 171 35.7
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 6.7e-08 61.6 171 35.7
FAN27G2046 Fragaria x ananassa HOM05D014836 ORTHO05D017926 6.7e-08 61.6 170 36.5
Oeu012641.1 Olea europaea HOM05D001921 ORTHO05D001784 8.8e-08 61.2 165 37.0
Sabra06G0203000 Salix brachista HOM05D001921 ORTHO05D001784 1.1e-07 60.8 172 35.5
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 1.5e-07 60.5 180 35.6
SabraUnG0005100 Salix brachista HOM05D001921 ORTHO05D001784 1.5e-07 60.5 172 35.5
A01p06280 Brassica napus HOM05D001921 ORTHO05D001784 2.0e-07 60.1 150 33.3
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.6e-07 59.7 171 35.7
Potri.006G260000 Populus trichocarpa HOM05D001921 ORTHO05D001784 2.6e-07 59.7 150 38.0
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 2.6e-07 59.7 123 37.4
PGSC0003DMG400029898 Solanum tuberosum HOM05D001921 ORTHO05D001784 3.3e-07 59.3 154 34.4
Aa31sc859G10 Aethionema arabicum HOM05D001921 ORTHO05D001784 4.4e-07 58.9 132 31.8
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 4.4e-07 58.9 139 35.3
Rhsim02G0206800 Rhododendron simsii HOM05D001921 ORTHO05D001784 5.7e-07 58.5 165 36.4
Solyc08g041860.1 Solanum lycopersicum HOM05D001921 ORTHO05D001784 5.7e-07 58.5 152 36.2
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 5.7e-07 58.5 160 34.4
Sopen08g012070 Solanum pennellii HOM05D001921 ORTHO05D001784 7.4e-07 58.2 152 36.2
AT2G25250 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 1.3e-06 57.4 174 32.2
Cpa.g.sc127.3 Carica papaya HOM05D001921 ORTHO05D001784 1.3e-06 57.4 166 35.5
FAN20G2754 Fragaria x ananassa HOM05D014836 ORTHO05D017926 1.3e-06 57.4 170 35.9
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 1.3e-06 57.4 146 33.6
Sp7g29820 Schrenkiella parvula HOM05D001921 ORTHO05D001784 1.3e-06 57.4 188 31.4
THA.LOC104803850 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 1.3e-06 57.4 192 31.2
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 1.7e-06 57.0 172 34.9
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 2.2e-06 56.6 187 32.1
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 2.2e-06 56.6 160 35.0
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 2.2e-06 56.6 118 37.3
Rhsim03G0253600 Rhododendron simsii HOM05D001921 ORTHO05D001784 2.2e-06 56.6 172 34.3
Sabra18G0025100 Salix brachista HOM05D001921 ORTHO05D001784 2.2e-06 56.6 176 34.1
BolC1t00688H Brassica oleracea HOM05D001921 ORTHO05D001784 2.8e-06 56.2 148 30.4
Haze_21453 Corylus avellana HOM05D001921 ORTHO05D001784 2.8e-06 56.2 167 34.1
VMungo1309G2915 Vigna mungo HOM05D001921 ORTHO05D001784 3.7e-06 55.8 164 31.7
Cfa013095 Carpinus fangiana HOM05D001921 ORTHO05D001784 4.8e-06 55.5 167 35.9
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 4.8e-06 55.5 119 35.3
PGR102G2943 Punica granatum HOM05D001921 ORTHO05D001784 4.8e-06 55.5 119 37.8
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 4.8e-06 55.5 137 34.3
BcaB08g35169 Brassica carinata HOM05D018780 ORTHO05D001784 6.3e-06 55.1 159 33.3
Eucgr.C02723 Eucalyptus grandis HOM05D001921 ORTHO05D001784 6.3e-06 55.1 130 34.6
Medtr2g461300 Medicago truncatula HOM05D001921 ORTHO05D001784 6.3e-06 55.1 142 38.0
TWI63G0810 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 6.3e-06 55.1 171 33.3
CAN.G1045.40 Capsicum annuum HOM05D001921 ORTHO05D001784 8.2e-06 54.7 162 35.2


User provided reference genes

Program Settings