Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 3.3e-95 351.7 173 100.0
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.1e-66 256.9 158 78.5
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 7.1e-66 254.2 158 78.5
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 9.3e-66 253.8 158 76.6
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.2e-65 253.4 158 76.6
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 1.2e-65 253.4 158 75.3
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 2.7e-65 252.3 158 75.9
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 3.5e-65 251.9 158 74.7
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 6.0e-65 251.1 158 75.3
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 6.0e-65 251.1 158 75.9
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 6.0e-65 251.1 158 74.1
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.0e-64 250.4 158 75.9
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 1.8e-64 249.6 158 74.1
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 3.0e-64 248.8 158 74.7
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 3.9e-64 248.4 158 73.4
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 6.7e-64 247.7 158 72.8
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 6.7e-64 247.7 158 75.3
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 8.7e-64 247.3 158 73.4
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 8.7e-64 247.3 158 74.7
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.5e-63 246.5 165 73.3
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 5.6e-63 244.6 158 72.2
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 4.8e-62 241.5 158 70.9
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 4.8e-62 241.5 158 70.9
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 8.1e-62 240.7 158 74.7
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 1.1e-61 240.4 158 72.8
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.8e-61 239.6 158 72.2
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 1.8e-61 239.6 158 72.2
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 4.0e-61 238.4 158 69.0
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 4.0e-61 238.4 158 69.0
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 4.0e-61 238.4 165 68.5
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.2e-60 236.9 165 68.5
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 3.4e-60 235.3 158 70.9
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 4.5e-60 235.0 166 69.3
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 5.8e-60 234.6 165 67.9
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 7.6e-60 234.2 158 72.2
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 1.0e-59 233.8 178 65.7
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.3e-59 233.4 158 69.6
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 1.3e-59 233.4 158 69.6
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 1.3e-59 233.4 159 71.1
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.7e-59 233.0 158 70.3
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 2.2e-59 232.6 158 69.0
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 2.9e-59 232.3 176 65.9
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 3.8e-59 231.9 171 64.3
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 1.4e-58 229.9 157 65.6
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.4e-58 229.9 158 69.0
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 4.2e-58 228.4 158 68.4
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.6e-57 226.5 158 67.1
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.7e-57 225.7 159 65.4
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 3.5e-57 225.3 158 67.1
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 6.0e-57 224.6 158 66.5
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 6.0e-57 224.6 160 66.2
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.0e-57 224.6 158 66.5
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 6.0e-57 224.6 158 66.5
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 7.9e-57 224.2 158 67.1
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 7.9e-57 224.2 158 65.2
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 7.9e-57 224.2 158 67.1
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 1.3e-56 223.4 158 65.8
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-56 223.4 158 66.5
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-56 223.4 160 65.6
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 1.3e-56 223.4 158 66.5
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.3e-56 223.4 156 69.2
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.3e-56 223.4 158 66.5
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.1e-55 220.3 158 66.5
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.5e-55 219.9 162 67.9
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 1.9e-55 219.5 145 71.0
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.6e-54 216.5 148 68.2
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 2.1e-54 216.1 136 73.5
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 6.2e-54 214.5 158 63.9
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 8.2e-54 214.2 145 73.1
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 3.1e-53 212.2 159 63.5
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 2.6e-52 209.1 145 67.6
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.0e-51 207.2 145 67.6
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.0e-51 207.2 145 66.2
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 3.8e-51 205.3 139 69.8
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 8.4e-51 204.1 158 65.2
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 3.2e-50 202.2 167 61.1
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 9.3e-50 200.7 164 59.8
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 3.5e-49 198.7 158 58.2
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 7.9e-49 197.6 164 57.3
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 5.1e-48 194.9 164 61.0
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 5.1e-48 194.9 158 57.6
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 6.3e-46 188.0 137 65.0
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 4.1e-45 185.3 237 43.0
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 1.5e-44 183.3 153 55.6
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.6e-44 182.6 119 72.3
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 3.4e-44 182.2 158 55.7
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.2e-43 179.5 145 63.4
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 5.0e-43 178.3 130 64.6
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.2e-41 173.7 176 52.8
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 9.7e-39 164.1 158 50.6
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 6.3e-38 161.4 97 75.3
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 1.8e-37 159.8 128 57.0
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 7.7e-36 154.5 158 50.0
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 1.3e-35 153.7 145 56.6
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 2.9e-35 152.5 109 67.0
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 2.5e-34 149.4 109 66.1
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 4.2e-34 148.7 124 59.7
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 9.4e-34 147.5 107 63.6
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.2e-33 147.1 102 68.6
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 6.1e-33 144.8 111 65.8
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-32 142.9 88 76.1
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.5e-31 140.2 99 68.7
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 2.6e-31 139.4 103 65.0
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.4e-29 133.7 96 68.8
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-28 130.6 99 60.6
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.5e-28 130.2 96 61.5
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 3.5e-28 129.0 100 60.0
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 7.7e-28 127.9 96 58.3
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.7e-27 126.7 131 55.0
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 9.4e-26 120.9 75 77.3
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 1.1e-23 114.0 138 42.8
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 3.8e-19 99.0 66 74.2
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.5e-18 96.3 155 32.3
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.7e-14 82.4 49 79.6
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.5e-12 75.9 48 75.0
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.2e-11 73.2 61 54.1
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 5.0e-11 72.0 49 69.4


User provided reference genes

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