Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 1.0e-79 300.1 156 100.0
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 2.4e-52 209.1 148 74.3
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 9.0e-52 207.2 130 80.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 1.2e-51 206.8 145 74.5
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 2.0e-51 206.1 151 72.8
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 2.6e-51 205.7 158 69.6
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 7.6e-51 204.1 144 71.5
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 7.6e-51 204.1 148 72.3
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.3e-50 203.4 152 72.4
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 2.2e-50 202.6 133 75.2
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 3.8e-50 201.8 158 69.6
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 3.8e-50 201.8 150 70.7
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 6.4e-50 201.1 132 78.8
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 1.1e-49 200.3 153 70.6
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 1.1e-49 200.3 150 72.7
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 1.1e-49 200.3 138 76.1
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 1.9e-49 199.5 128 79.7
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.4e-49 199.1 133 72.2
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 3.2e-49 198.7 133 76.7
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 3.2e-49 198.7 151 67.5
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 3.2e-49 198.7 127 77.2
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 3.2e-49 198.7 153 69.9
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.6e-48 196.4 129 75.2
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.6e-48 196.4 129 75.2
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.6e-48 196.4 134 74.6
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 3.5e-48 195.3 150 71.3
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 3.5e-48 195.3 133 75.2
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 6.0e-48 194.5 127 76.4
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 6.0e-48 194.5 132 73.5
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 7.9e-48 194.1 132 73.5
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 7.9e-48 194.1 129 75.2
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.0e-47 193.7 129 72.9
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 1.8e-47 193.0 131 71.0
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 1.8e-47 193.0 152 67.1
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 2.3e-47 192.6 142 69.7
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 3.9e-47 191.8 154 65.6
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 3.9e-47 191.8 148 68.9
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 3.9e-47 191.8 128 75.0
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 3.9e-47 191.8 127 74.0
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 5.1e-47 191.4 151 66.2
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 6.7e-47 191.0 129 73.6
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 6.7e-47 191.0 129 72.1
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 6.7e-47 191.0 151 68.9
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 6.7e-47 191.0 148 68.2
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 8.7e-47 190.7 148 68.2
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 1.1e-46 190.3 129 72.1
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.1e-46 190.3 147 65.3
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.5e-46 189.9 133 69.9
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 1.9e-46 189.5 125 75.2
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 2.5e-46 189.1 127 71.7
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 3.3e-46 188.7 125 73.6
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 3.3e-46 188.7 125 74.4
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 3.3e-46 188.7 125 73.6
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 4.3e-46 188.3 126 73.8
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 5.6e-46 188.0 125 75.2
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 5.6e-46 188.0 133 75.2
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 7.4e-46 187.6 126 73.0
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 9.6e-46 187.2 134 70.1
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.3e-45 186.8 128 71.9
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.3e-45 186.8 127 72.4
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 1.3e-45 186.8 128 71.9
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.3e-45 186.8 128 71.9
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.6e-45 186.4 154 66.2
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 2.8e-45 185.7 134 71.6
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 3.7e-45 185.3 142 69.7
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 3.7e-45 185.3 128 70.3
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 4.8e-45 184.9 128 71.1
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 8.2e-45 184.1 156 62.2
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 1.1e-44 183.7 128 73.4
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.1e-44 183.7 149 67.1
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.1e-44 183.7 150 67.3
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 2.4e-44 182.6 127 70.1
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 3.1e-44 182.2 127 69.3
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 4.0e-44 181.8 138 68.8
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 4.0e-44 181.8 151 66.2
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 4.0e-44 181.8 154 64.9
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 6.9e-44 181.0 148 65.5
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 6.9e-44 181.0 148 63.5
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 6.9e-44 181.0 132 70.5
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 9.0e-44 180.6 125 69.6
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 9.0e-44 180.6 134 70.1
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 1.5e-43 179.9 143 62.2
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 3.4e-43 178.7 135 68.9
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 6.5e-42 174.5 128 70.3
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 6.5e-42 174.5 125 71.2
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 7.1e-41 171.0 119 72.3
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 7.1e-41 171.0 134 64.2
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 7.1e-41 171.0 121 71.1
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 7.1e-41 171.0 134 66.4
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.1e-40 169.5 129 65.1
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 4.6e-40 168.3 132 64.4
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 1.0e-39 167.2 125 68.8
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.8e-39 166.4 133 62.4
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 2.3e-39 166.0 119 69.7
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 3.9e-39 165.2 143 63.6
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 5.1e-39 164.9 134 65.7
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 5.1e-39 164.9 127 66.9
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.1e-38 163.7 127 65.4
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.3e-37 160.2 127 63.0
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 2.2e-37 159.5 125 66.4
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 2.4e-36 156.0 149 57.0
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.5e-35 153.3 134 63.4
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 2.0e-35 152.9 127 62.2
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 5.9e-35 151.4 126 62.7
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 2.2e-34 149.4 124 63.7
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 1.5e-30 136.7 124 55.6
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 4.3e-30 135.2 147 50.3
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 5.7e-30 134.8 147 50.3
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 2.2e-29 132.9 126 53.2
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 9.1e-28 127.5 90 66.7
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.0e-26 124.0 122 55.7
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 2.5e-25 119.4 104 63.5
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 2.5e-25 119.4 128 48.4
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 6.1e-24 114.8 116 53.4
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 3.9e-23 112.1 128 50.0
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.8e-20 103.2 131 46.6
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 3.5e-19 99.0 94 59.6
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 7.7e-19 97.8 133 42.9
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 6.5e-18 94.7 81 50.6
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 3.2e-17 92.4 126 44.4
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 1.2e-16 90.5 132 39.4
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.1e-14 84.0 118 44.9
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 7.7e-11 71.2 59 67.8
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.1e-09 67.4 90 45.6
SEGI_35230 Sequoiadendron giganteum HOM05D006402 ORTHO05D387249 2.6e-06 56.2 52 48.1


User provided reference genes

Program Settings