Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 1.7e-87 326.2 196 100.0
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.7e-31 140.2 170 49.4
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 2.9e-31 139.4 170 50.0
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 8.4e-31 137.9 170 49.4
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 8.4e-31 137.9 170 49.4
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 3.2e-30 136.0 185 49.7
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 3.2e-30 136.0 190 46.8
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 7.1e-30 134.8 193 45.6
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 1.2e-29 134.0 174 50.6
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.2e-29 134.0 170 48.2
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 2.1e-29 133.3 170 48.8
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 7.9e-29 131.3 174 50.0
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 6.7e-28 128.3 174 50.0
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 7.4e-27 124.8 190 46.8
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 9.6e-27 124.4 188 45.2
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 1.6e-26 123.6 194 45.9
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 4.8e-26 122.1 192 45.8
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 8.2e-26 121.3 176 45.5
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 1.1e-25 120.9 185 45.9
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 1.4e-25 120.6 192 42.7
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 3.1e-25 119.4 193 46.1
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 6.9e-25 118.2 176 44.9
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 6.9e-25 118.2 158 46.8
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 9.0e-25 117.9 196 43.4
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 9.0e-25 117.9 174 44.3
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 1.5e-24 117.1 183 44.8
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 2.0e-24 116.7 154 48.1
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 2.6e-24 116.3 180 44.4
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 7.6e-24 114.8 192 42.2
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 6.5e-23 111.7 161 44.7
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 8.4e-23 111.3 190 41.6
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 8.4e-23 111.3 188 46.8
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 1.1e-22 110.9 161 45.3
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 3.2e-22 109.4 173 43.9
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 3.2e-22 109.4 187 42.8
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 5.5e-22 108.6 170 43.5
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 2.1e-21 106.7 177 44.1
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 3.5e-21 105.9 200 41.5
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 4.6e-21 105.5 194 40.2
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 4.6e-21 105.5 194 40.2
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 4.6e-21 105.5 196 40.3
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 6.0e-21 105.1 183 41.5
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 6.0e-21 105.1 183 41.5
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 6.0e-21 105.1 177 41.8
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 1.0e-20 104.4 159 43.4
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 1.0e-20 104.4 176 42.0
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 1.0e-20 104.4 181 46.4
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 1.3e-20 104.0 195 41.0
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 1.8e-20 103.6 194 39.7
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 1.8e-20 103.6 189 41.3
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 2.3e-20 103.2 183 42.1
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 3.0e-20 102.8 148 43.9
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 3.0e-20 102.8 181 42.5
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 3.9e-20 102.4 194 39.7
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 5.1e-20 102.1 208 38.9
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 6.7e-20 101.7 186 40.9
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 6.7e-20 101.7 157 45.2
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 6.7e-20 101.7 106 57.5
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.1e-19 100.9 188 41.0
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 1.5e-19 100.5 157 43.9
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 1.5e-19 100.5 181 41.4
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 1.9e-19 100.1 190 40.5
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 2.5e-19 99.8 143 48.3
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 2.5e-19 99.8 178 41.0
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 3.3e-19 99.4 157 43.3
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 5.7e-19 98.6 182 39.0
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 7.4e-19 98.2 169 40.8
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 7.4e-19 98.2 148 43.2
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 1.3e-18 97.4 187 41.2
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 1.3e-18 97.4 183 38.8
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.3e-18 97.4 148 42.6
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 1.6e-18 97.1 110 52.7
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 1.6e-18 97.1 154 44.8
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 1.6e-18 97.1 139 44.6
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 2.2e-18 96.7 196 39.8
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 2.2e-18 96.7 195 37.4
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 2.8e-18 96.3 168 40.5
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 2.8e-18 96.3 185 37.8
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 6.3e-18 95.1 159 42.8
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 6.3e-18 95.1 148 41.9
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 1.1e-17 94.4 178 39.9
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 1.1e-17 94.4 154 42.9
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 1.8e-17 93.6 169 40.2
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 3.1e-17 92.8 175 38.9
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 3.1e-17 92.8 169 39.6
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 4.1e-17 92.4 182 38.5
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 4.1e-17 92.4 172 38.4
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.1e-17 92.4 172 38.4
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 4.1e-17 92.4 191 38.2
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 4.1e-17 92.4 176 39.2
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 4.1e-17 92.4 94 53.2
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 9.0e-17 91.3 160 41.9
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 1.2e-16 90.9 197 44.2
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 1.2e-16 90.9 205 39.5
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 2.0e-16 90.1 180 38.3
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 4.5e-16 89.0 143 45.5
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 5.9e-16 88.6 196 39.3
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 7.7e-16 88.2 189 39.2
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 2.2e-15 86.7 160 40.0
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 2.2e-15 86.7 88 55.7
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 5.0e-15 85.5 111 46.8
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 8.5e-15 84.7 194 36.6
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 8.5e-15 84.7 195 33.8
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 2.7e-13 79.7 103 48.5
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 3.0e-12 76.3 87 48.3
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 5.1e-12 75.5 83 50.6
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 6.7e-12 75.1 87 48.3
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 1.1e-11 74.3 69 58.0
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 2.0e-11 73.6 97 45.4
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 9.7e-11 71.2 97 44.3
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.4e-09 67.4 68 55.9
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.8e-09 67.0 68 54.4
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 3.1e-09 66.2 72 50.0
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 1.5e-08 63.9 135 35.6
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 1.7e-07 60.5 80 45.0


User provided reference genes

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