Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 2.1e-129 465.7 229 100.0
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 7.6e-100 367.5 224 78.6
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 1.9e-98 362.8 229 75.5
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 5.5e-98 361.3 227 75.8
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 7.1e-98 360.9 227 75.8
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 4.6e-97 358.2 226 75.7
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 1.0e-96 357.1 226 75.2
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 1.8e-96 356.3 229 73.8
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 1.8e-96 356.3 226 75.2
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 1.8e-96 356.3 226 76.1
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 3.0e-96 355.5 230 75.7
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 1.1e-95 353.6 226 75.2
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 1.5e-95 353.2 229 74.2
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 5.7e-95 351.3 226 73.5
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 7.4e-95 350.9 241 73.0
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 1.6e-94 349.7 228 73.7
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 2.2e-94 349.4 224 73.2
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 2.2e-94 349.4 225 73.3
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 2.8e-94 349.0 229 72.1
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 6.3e-94 347.8 227 72.2
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 4.1e-93 345.1 227 74.0
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 6.9e-93 344.4 229 72.1
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 9.0e-93 344.0 220 74.5
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.5e-92 343.2 229 71.6
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 2.6e-92 342.4 227 67.8
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 2.6e-92 342.4 229 71.6
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 2.9e-91 339.0 228 68.4
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 3.8e-91 338.6 229 66.8
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 1.4e-90 336.7 228 70.2
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 2.5e-90 335.9 224 69.6
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 4.2e-90 335.1 224 72.3
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 5.5e-90 334.7 220 73.6
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 7.2e-90 334.3 227 71.4
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 9.4e-90 334.0 230 71.7
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 1.2e-89 333.6 224 71.0
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 1.2e-89 333.6 223 70.0
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 1.6e-89 333.2 247 64.8
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 2.7e-89 332.4 221 71.0
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 4.6e-89 331.6 228 69.3
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 1.4e-88 330.1 224 70.1
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 1.8e-88 329.7 223 70.4
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 2.3e-88 329.3 224 68.3
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 3.0e-88 328.9 230 70.9
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 3.0e-88 328.9 224 69.6
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 3.9e-88 328.6 222 69.4
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 6.7e-88 327.8 225 69.3
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 6.7e-88 327.8 224 69.6
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 4.3e-87 325.1 224 68.3
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 9.7e-87 323.9 229 66.8
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 1.7e-86 323.2 227 67.8
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 8.2e-86 320.9 226 66.4
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 8.2e-86 320.9 228 66.2
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 8.2e-86 320.9 225 68.0
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 1.1e-85 320.5 220 65.9
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 1.4e-85 320.1 227 65.6
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 1.4e-85 320.1 228 67.1
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 1.8e-85 319.7 228 67.5
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 3.1e-85 318.9 232 66.8
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 3.1e-85 318.9 222 67.6
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 4.1e-85 318.5 229 68.1
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 6.9e-85 317.8 224 66.5
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 1.2e-84 317.0 228 66.2
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 1.2e-84 317.0 228 66.2
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 4.5e-84 315.1 230 68.3
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.7e-83 313.2 222 68.0
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 3.8e-83 312.0 221 66.1
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 5.0e-83 311.6 229 63.8
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 6.5e-83 311.2 229 65.1
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 8.5e-83 310.8 225 67.1
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 1.4e-82 310.1 206 69.9
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 4.2e-82 308.5 225 66.2
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 5.5e-82 308.1 229 62.9
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 7.2e-82 307.8 221 65.6
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 9.4e-82 307.4 224 66.1
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.6e-81 306.6 222 66.7
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.7e-81 305.8 248 63.3
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.0e-80 302.4 248 62.9
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 5.1e-80 301.6 248 62.5
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 8.8e-80 300.8 225 65.8
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 5.7e-79 298.1 231 63.6
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 1.7e-78 296.6 221 62.9
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 3.7e-78 295.4 223 64.1
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 1.0e-72 277.3 230 57.8
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 6.7e-72 274.6 230 57.4
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 3.3e-71 272.3 163 76.1
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 9.1e-69 264.2 170 72.9
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 2.6e-68 262.7 238 54.6
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 4.5e-68 261.9 221 61.1
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 1.3e-67 260.4 236 59.3
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 8.5e-67 257.7 161 75.8
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 1.1e-66 257.3 236 58.9
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 1.5e-66 256.9 163 73.0
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 2.7e-65 252.7 221 53.8
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 6.1e-65 251.5 175 69.1
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 4.0e-64 248.8 141 80.1
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 8.8e-64 247.7 158 71.5
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 3.7e-62 242.3 172 68.0
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 5.0e-59 231.9 224 53.6
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 1.5e-58 230.3 226 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 5.5e-58 228.4 222 50.5
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 3.0e-56 222.6 220 50.9
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 1.5e-55 220.3 169 62.7
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 1.3e-54 217.2 169 62.1
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 5.4e-53 211.8 174 59.2
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 2.0e-52 209.9 220 51.4
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 3.0e-48 196.1 122 73.0
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 2.6e-47 193.0 143 62.9
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 3.4e-47 192.6 122 70.5
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 1.2e-44 184.1 250 41.6
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.5e-39 167.2 116 69.8
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 1.5e-39 167.2 105 73.3
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 1.4e-37 160.6 151 57.6
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 2.7e-36 156.4 144 59.0
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 3.0e-35 152.9 126 57.9
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 9.2e-29 131.3 226 36.7
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 1.3e-27 127.5 107 60.7
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 1.6e-17 94.0 90 47.8
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 1.6e-17 94.0 90 47.8
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 2.4e-16 90.1 68 58.8
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 7.6e-15 85.1 52 76.9
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 7.6e-15 85.1 52 76.9
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 8.7e-11 71.6 47 70.2
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 1.6e-09 67.4 184 28.3
PSO339G4170 Papaver somniferum HOM05D003180 ORTHO05D003664 2.0e-07 60.5 176 30.1
PSO384G2781 Papaver somniferum HOM05D003180 ORTHO05D003664 2.0e-07 60.5 176 30.1
TAR633G2013 Trochodendron aralioides HOM05D003180 ORTHO05D003664 2.0e-07 60.5 174 31.6
ClCG02G010000 Citrullus lanatus HOM05D006820 ORTHO05D008526 2.6e-07 60.1 30 83.3
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 2.6e-07 60.1 184 29.9
PSO339G2845 Papaver somniferum HOM05D003180 ORTHO05D003664 3.4e-07 59.7 174 30.5
PSO384G3113 Papaver somniferum HOM05D003180 ORTHO05D003664 3.4e-07 59.7 176 30.1
PSO384G1057 Papaver somniferum HOM05D003180 ORTHO05D003664 5.8e-07 58.9 174 29.9
Aqoxy1G00385 Aquilegia oxysepala HOM05D003180 ORTHO05D003664 7.6e-07 58.5 178 29.2
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 7.6e-07 58.5 193 29.0
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 1.3e-06 57.8 190 28.9
PSO339G0869 Papaver somniferum HOM05D003180 ORTHO05D003664 1.7e-06 57.4 174 29.9
PSO384G1806 Papaver somniferum HOM05D003180 ORTHO05D003664 1.7e-06 57.4 174 29.9
TAR381G0032 Trochodendron aralioides HOM05D003180 ORTHO05D003664 1.7e-06 57.4 190 31.1
Aa31LG1G21340 Aethionema arabicum HOM05D003180 ORTHO05D003664 2.9e-06 56.6 182 27.5
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 2.9e-06 56.6 184 27.7
Hund16314 Selenicereus undatus HOM05D003180 ORTHO05D003664 2.9e-06 56.6 187 29.4
Eucgr.I00967 Eucalyptus grandis HOM05D003180 ORTHO05D003664 4.9e-06 55.8 174 30.5
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 6.4e-06 55.5 190 28.4
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 6.4e-06 55.5 184 28.3
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 8.4e-06 55.1 185 27.6
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 8.4e-06 55.1 184 27.7
CSS0036818 Camellia sinensis var. sinensis HOM05D003180 ORTHO05D003664 8.4e-06 55.1 174 28.2
Ciclev10026175m.g Citrus clementina HOM05D003180 ORTHO05D003664 8.4e-06 55.1 216 28.7


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