Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2878 Cannabis sativa HOM05D010331 ORTHO05D000001 1.2e-95 353.2 181 100.0
CANSAT21G1937 Cannabis sativa HOM05D000006 ORTHO05D000001 6.4e-25 118.2 125 56.8
CANSAT64G0990 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-23 113.2 111 57.7
CANSAT80G1908 Cannabis sativa HOM05D000006 ORTHO05D000001 1.3e-22 110.5 82 68.3
MELO3C008402.2 Cucumis melo HOM05D000006 ORTHO05D000001 1.1e-13 80.9 76 52.6
MELO3C018244.2 Cucumis melo HOM05D000006 ORTHO05D000001 6.2e-12 75.1 112 38.4
Oeu042177.1 Olea europaea HOM05D014089 ORTHO05D011268 6.2e-12 75.1 82 46.3
Oeu012880.1 Olea europaea HOM05D014089 ORTHO05D011268 1.8e-11 73.6 75 50.7
CSS0008448 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 8.9e-11 71.2 82 43.9
CSS0043824 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 8.9e-11 71.2 82 43.9
Oeu012266.1 Olea europaea HOM05D000006 ORTHO05D000001 8.9e-11 71.2 82 45.1
Gorai.004G068900 Gossypium raimondii HOM05D000006 ORTHO05D000001 1.2e-10 70.9 83 47.0
TWI09G0578 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.2e-10 70.9 140 37.9
CSS0004288 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 1.5e-10 70.5 82 42.7
MELO3C003289.2 Cucumis melo HOM05D000006 ORTHO05D000001 1.5e-10 70.5 75 45.3
Gorai.010G168500 Gossypium raimondii HOM05D000006 ORTHO05D000001 1.5e-10 70.5 76 44.7
CSS0028883 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 2.0e-10 70.1 82 42.7
TWI53G0903 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.0e-10 70.1 73 49.3
CSS0039424 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 2.6e-10 69.7 94 40.4
ClCG09G015530 Citrullus lanatus HOM05D000027 ORTHO05D000066 2.6e-10 69.7 76 47.4
CSS0042465 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 3.4e-10 69.3 92 42.4
CSS0050272 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 4.4e-10 68.9 82 42.7
CiPaw.06G149500 Carya illinoinensis HOM05D017580 ORTHO05D000001 4.4e-10 68.9 73 45.2
Gorai.003G168400 Gossypium raimondii HOM05D000006 ORTHO05D000001 5.8e-10 68.6 73 43.8
CSS0033845 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 9.9e-10 67.8 82 42.7
Gohir.D09G053350 Gossypium hirsutum HOM05D000006 ORTHO05D000001 1.7e-09 67.0 78 42.3
TWI39G0759 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 3.8e-09 65.9 73 46.6
MELO3C029602.2 Cucumis melo HOM05D000006 ORTHO05D000001 4.9e-09 65.5 126 32.5
MELO3C032096.2 Cucumis melo HOM05D000006 ORTHO05D000001 1.4e-08 63.9 71 40.8
Gorai.001G222900 Gossypium raimondii HOM05D000006 ORTHO05D000001 1.4e-08 63.9 89 41.6
Gorai.006G054400 Gossypium raimondii HOM05D000006 ORTHO05D000001 1.4e-08 63.9 106 35.8
CSS0038264 Camellia sinensis var. sinensis HOM05D010331 ORTHO05D000001 1.9e-08 63.5 82 40.2
QL09p034643 Quercus lobata HOM05D000273 ORTHO05D000198 1.9e-08 63.5 88 38.6
QL11p020175 Quercus lobata HOM05D011350 ORTHO05D000370 1.9e-08 63.5 106 37.7
MELO3C034502.2 Cucumis melo HOM05D000006 ORTHO05D000001 3.2e-08 62.8 64 46.9
Gohir.D09G099050 Gossypium hirsutum HOM05D000006 ORTHO05D000001 3.2e-08 62.8 71 42.3
MBI12_g47551_MAGBIO Magnolia biondii HOM05D000006 ORTHO05D000001 3.2e-08 62.8 66 47.0
MELO3C028877.2 Cucumis melo HOM05D003454 ORTHO05D000001 4.2e-08 62.4 108 33.3
QL05p038736 Quercus lobata HOM05D011350 ORTHO05D000001 4.2e-08 62.4 106 36.8
CANSAT01G1590 Cannabis sativa HOM05D000006 ORTHO05D000001 5.4e-08 62.0 110 35.5
CANSAT54G1066 Cannabis sativa HOM05D000006 ORTHO05D000001 5.4e-08 62.0 121 32.2
ClCG02G009730 Citrullus lanatus HOM05D000006 ORTHO05D000001 5.4e-08 62.0 62 46.8
CANSAT35G0184 Cannabis sativa HOM05D000006 ORTHO05D000001 7.1e-08 61.6 121 32.2
Gorai.002G106200 Gossypium raimondii HOM05D000006 ORTHO05D000001 7.1e-08 61.6 73 42.5
CANSAT54G2260 Cannabis sativa HOM05D000006 ORTHO05D000001 9.3e-08 61.2 82 37.8
CANSAT56G2615 Cannabis sativa HOM05D000006 ORTHO05D000001 9.3e-08 61.2 98 34.7
Gorai.002G177800 Gossypium raimondii HOM05D010331 ORTHO05D000001 9.3e-08 61.2 76 36.8
Gorai.012G038500 Gossypium raimondii HOM05D010331 ORTHO05D000001 1.2e-07 60.8 91 35.2
Psat0s1379g0040 Pisum sativum HOM05D000006 ORTHO05D000001 1.2e-07 60.8 75 41.3
QL04p020058 Quercus lobata HOM05D011350 ORTHO05D000001 1.2e-07 60.8 76 42.1
CANSAT11G1292 Cannabis sativa HOM05D000006 ORTHO05D000001 2.1e-07 60.1 110 35.5
CANSAT56G1815 Cannabis sativa HOM05D000006 ORTHO05D000001 2.1e-07 60.1 76 36.8
Rhsim07G0003700 Rhododendron simsii HOM05D000006 ORTHO05D000001 2.1e-07 60.1 76 43.4
Gorai.005G090700 Gossypium raimondii HOM05D000006 ORTHO05D000001 2.7e-07 59.7 81 35.8
Gorai.011G188300 Gossypium raimondii HOM05D000006 ORTHO05D000001 3.5e-07 59.3 76 35.5
CANSAT78G0422 Cannabis sativa HOM05D000006 ORTHO05D000001 4.6e-07 58.9 93 35.5
Gorai.010G160800 Gossypium raimondii HOM05D000006 ORTHO05D000001 4.6e-07 58.9 55 54.5
Hund15273 Selenicereus undatus HOM05D000006 ORTHO05D000001 4.6e-07 58.9 78 35.9
CANSAT80G1572 Cannabis sativa HOM05D000006 ORTHO05D000001 6.0e-07 58.5 110 34.5
RcHm_v2.0_Chr3g0462591 Rosa chinensis HOM05D000006 ORTHO05D000001 6.0e-07 58.5 97 33.0
Sopen04g018140 Solanum pennellii HOM05D000006 ORTHO05D000001 6.0e-07 58.5 77 39.0
Sopen11g020980 Solanum pennellii HOM05D000006 ORTHO05D000001 6.0e-07 58.5 127 32.3
Sopen11g025330 Solanum pennellii HOM05D000006 ORTHO05D000001 6.0e-07 58.5 108 34.3
CANSAT21G1245 Cannabis sativa HOM05D000006 ORTHO05D000001 7.8e-07 58.2 76 38.2
Sopen02g012370 Solanum pennellii HOM05D000006 ORTHO05D000001 7.8e-07 58.2 77 37.7
Sopen04g019810 Solanum pennellii HOM05D000006 ORTHO05D000695 7.8e-07 58.2 108 34.3
TWI59G0957 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.8e-07 58.2 70 40.0
RcHm_v2.0_Chr7g0183661 Rosa chinensis HOM05D000109 ORTHO05D000001 1.0e-06 57.8 83 32.5
Atru.chr12.2495 Acer truncatum HOM05D000006 ORTHO05D000001 1.3e-06 57.4 97 38.1
Sopen05g026130 Solanum pennellii HOM05D000006 ORTHO05D000001 1.7e-06 57.0 108 33.3
PSO349G0024 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-06 56.6 69 39.1
Sopen05g025070 Solanum pennellii HOM05D000006 ORTHO05D000001 2.3e-06 56.6 77 36.4
TWI60G0104 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 2.3e-06 56.6 61 47.5
CANSAT56G1315 Cannabis sativa HOM05D000006 ORTHO05D000001 3.0e-06 56.2 97 35.1
Gorai.011G153600 Gossypium raimondii HOM05D010331 ORTHO05D000001 3.0e-06 56.2 70 41.4
RcHm_v2.0_Chr3g0456701 Rosa chinensis HOM05D000006 ORTHO05D000001 3.0e-06 56.2 83 31.3
Sopen02g010590 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 56.2 81 35.8
Sopen03g016180 Solanum pennellii HOM05D000006 ORTHO05D000001 3.0e-06 56.2 77 36.4
Sopen08g008260 Solanum pennellii HOM05D000006 ORTHO05D000001 3.0e-06 56.2 83 36.1
Sopen08g018630 Solanum pennellii HOM05D000006 ORTHO05D000001 3.0e-06 56.2 108 33.3
AL123U10020 Arabidopsis lyrata HOM05D012795 ORTHO05D014047 3.9e-06 55.8 93 35.5
CANSAT56G1128 Cannabis sativa HOM05D000006 ORTHO05D000001 3.9e-06 55.8 116 29.3
Gorai.006G116000 Gossypium raimondii HOM05D010331 ORTHO05D000001 3.9e-06 55.8 80 41.2
Sopen01g022380 Solanum pennellii HOM05D000006 ORTHO05D000695 3.9e-06 55.8 108 33.3
Sopen12g008580 Solanum pennellii HOM05D000006 ORTHO05D000001 3.9e-06 55.8 74 37.8
ClCG09G015520 Citrullus lanatus HOM05D000006 ORTHO05D000001 5.1e-06 55.5 68 45.6
RcHm_v2.0_Chr4g0421211 Rosa chinensis HOM05D000006 ORTHO05D000001 5.1e-06 55.5 83 31.3
Sopen00g007970 Solanum pennellii HOM05D000006 ORTHO05D000001 5.1e-06 55.5 77 37.7
Sopen08g016740 Solanum pennellii HOM05D000006 ORTHO05D000001 5.1e-06 55.5 108 34.3
Sopen09g029420 Solanum pennellii HOM05D000006 ORTHO05D000001 5.1e-06 55.5 77 37.7
Sopen10g013200 Solanum pennellii HOM05D000006 ORTHO05D000001 5.1e-06 55.5 99 33.3
Sopen11g019790 Solanum pennellii HOM05D000006 ORTHO05D000001 5.1e-06 55.5 106 34.0
Sopen11g022180 Solanum pennellii HOM05D000006 ORTHO05D000001 5.1e-06 55.5 108 32.4
CANSAT11G1223 Cannabis sativa HOM05D000017 ORTHO05D000013 6.6e-06 55.1 107 32.7
Sopen01g029890 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 77 35.1
Sopen04g022230 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 77 35.1
Sopen04g023690 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 108 32.4
Sopen05g014050 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 83 32.5
Sopen05g026170 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 77 33.8
Sopen07g023680 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 77 35.1
Sopen07g025340 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 108 32.4
Sopen09g016290 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 83 32.5
Sopen10g017750 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 108 32.4
Sopen11g008670 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 96 33.3
Sopen11g022090 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 77 36.4
Sopen12g022020 Solanum pennellii HOM05D000006 ORTHO05D000001 6.6e-06 55.1 77 35.1
Gorai.001G251200 Gossypium raimondii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 76 39.5
PSO063G0565 Papaver somniferum HOM05D000002 ORTHO05D000001 8.7e-06 54.7 126 27.8
PSO782G4414 Papaver somniferum HOM05D000002 ORTHO05D000001 8.7e-06 54.7 84 31.0
Sopen01g009380 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 106 34.0
Sopen02g012360 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 83 31.3
Sopen03g025660 Solanum pennellii HOM05D000002 ORTHO05D000001 8.7e-06 54.7 83 32.5
Sopen04g013130 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 108 33.3
Sopen04g018420 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 108 32.4
Sopen04g024260 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 83 32.5
Sopen05g009690 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 106 33.0
Sopen05g022460 Solanum pennellii HOM05D000006 ORTHO05D000695 8.7e-06 54.7 77 36.4
Sopen05g025840 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 106 33.0
Sopen06g014360 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 83 32.5
Sopen09g024280 Solanum pennellii HOM05D000006 ORTHO05D000001 8.7e-06 54.7 83 31.3


User provided reference genes

Program Settings