Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 3.6e-142 508.4 295 100.0
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 4.4e-100 368.6 299 70.6
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 8.3e-99 364.4 307 74.9
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 1.6e-97 360.1 292 69.9
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 2.7e-97 359.4 312 74.4
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 5.1e-96 355.1 293 68.6
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.1e-95 354.0 293 68.6
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.1e-95 354.0 302 67.2
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 3.6e-94 349.0 265 73.6
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 4.7e-94 348.6 269 72.1
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.7e-94 348.6 293 68.6
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 6.2e-94 348.2 308 69.5
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 8.1e-94 347.8 294 67.3
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.1e-93 347.4 305 65.9
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.8e-93 346.7 289 68.9
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 3.1e-93 345.9 294 67.0
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 3.1e-93 345.9 291 70.1
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.5e-92 343.6 303 67.3
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 1.5e-92 343.6 294 68.0
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 3.4e-92 342.4 267 71.5
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 7.5e-92 341.3 297 70.0
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 1.3e-91 340.5 305 65.9
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 1.3e-91 340.5 322 63.4
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.2e-91 339.7 294 66.7
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 2.2e-91 339.7 282 68.1
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 2.9e-91 339.3 309 65.4
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 2.9e-91 339.3 268 70.5
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 3.7e-91 339.0 303 65.7
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.4e-90 337.0 301 65.4
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 1.9e-90 336.7 296 66.2
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 3.2e-90 335.9 291 68.0
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.2e-90 335.9 296 65.2
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 7.1e-90 334.7 305 67.9
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.2e-89 334.0 305 68.2
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 2.1e-89 333.2 267 70.0
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.1e-89 333.2 303 63.4
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.7e-89 332.8 301 66.8
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 4.6e-89 332.0 300 63.7
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 7.8e-89 331.3 294 63.6
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.7e-88 330.1 304 64.5
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 3.0e-88 329.3 301 63.5
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 5.1e-88 328.6 300 63.7
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 6.6e-88 328.2 264 72.7
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 8.6e-88 327.8 303 65.0
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.1e-87 327.4 292 64.0
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.1e-87 327.4 292 64.0
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.1e-87 327.4 301 67.4
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.5e-87 327.0 298 64.8
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 3.3e-87 325.9 258 69.8
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 4.3e-87 325.5 303 63.7
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.3e-87 325.5 307 60.6
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 5.6e-87 325.1 311 60.5
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 1.6e-86 323.6 287 63.4
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-86 323.6 288 63.9
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 3.1e-85 319.3 287 63.1
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 6.8e-85 318.2 294 63.9
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 6.8e-85 318.2 300 61.3
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.9e-85 317.8 292 63.0
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.9e-85 317.8 292 63.0
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 8.9e-85 317.8 298 61.4
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.2e-84 317.4 289 64.4
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.5e-84 317.0 289 63.7
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 4.4e-84 315.5 267 66.7
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.3e-83 313.9 291 61.9
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.7e-83 313.5 264 65.9
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 4.9e-83 312.0 264 65.5
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.1e-82 310.8 298 62.1
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.4e-82 310.5 301 60.8
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.9e-82 310.1 289 60.6
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 7.1e-82 308.1 317 58.0
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.6e-81 307.0 289 63.0
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 2.7e-81 306.2 296 61.1
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 2.7e-81 306.2 296 61.1
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 2.7e-81 306.2 301 60.5
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 4.6e-81 305.4 300 60.7
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 4.6e-81 305.4 303 59.4
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 6.0e-81 305.1 297 60.9
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 7.8e-81 304.7 311 58.8
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.0e-80 304.3 296 60.8
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.7e-80 303.5 196 81.6
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 6.6e-80 301.6 287 61.0
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 6.6e-80 301.6 313 57.8
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 3.3e-79 299.3 289 60.6
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 8.1e-78 294.7 196 77.6
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 5.3e-77 292.0 292 58.6
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 2.9e-75 286.2 347 52.4
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 5.4e-74 282.0 294 56.8
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 5.4e-74 282.0 181 82.9
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.1e-73 280.0 290 60.0
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.3e-72 277.3 300 56.0
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 3.0e-72 276.2 320 53.8
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 6.2e-70 268.5 290 56.2
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 1.2e-68 264.2 297 56.2
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 3.4e-68 262.7 293 55.6
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 4.5e-68 262.3 174 79.3
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 9.3e-66 254.6 279 55.9
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.0e-64 251.1 174 77.6
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.3e-62 244.2 292 52.4
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 3.1e-61 239.6 269 55.4
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 4.0e-61 239.2 413 42.6
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 8.4e-59 231.5 296 51.0
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 4.2e-58 229.2 301 50.8
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.6e-49 200.7 134 80.6
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 3.9e-48 196.1 226 53.5
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.9e-43 179.9 141 70.9
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 6.1e-41 172.2 181 59.1
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 3.9e-40 169.5 181 58.0
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.8e-38 163.3 127 71.7
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 7.7e-36 155.2 164 57.3
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 4.4e-31 139.4 157 55.4
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 9.1e-29 131.7 77 85.7
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.6e-28 130.2 154 51.3
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.0e-20 104.0 158 45.6
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 8.0e-17 92.0 223 33.2
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 8.3e-14 82.0 118 45.8
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 4.1e-13 79.7 121 45.5
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 5.3e-13 79.3 120 46.7
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.9e-10 70.9 42 78.6
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 5.7e-07 59.3 72 55.6


User provided reference genes

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