Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 1.7e-90 335.9 162 100.0
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 1.3e-61 240.0 159 74.2
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 3.8e-61 238.4 158 74.1
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 6.5e-61 237.7 158 73.4
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 8.4e-61 237.3 160 71.2
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 8.4e-61 237.3 158 73.4
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.4e-60 236.5 158 73.4
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 1.4e-60 236.5 144 79.9
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 1.9e-60 236.1 158 74.7
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 1.9e-60 236.1 146 78.1
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 7.1e-60 234.2 157 73.2
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 9.3e-60 233.8 162 69.8
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.2e-59 233.4 158 72.8
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 2.7e-59 232.3 148 75.0
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 2.7e-59 232.3 148 76.4
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 3.5e-59 231.9 147 76.2
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 4.6e-59 231.5 157 72.6
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 4.6e-59 231.5 157 72.6
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 7.9e-59 230.7 151 72.8
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 1.0e-58 230.3 153 74.5
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 1.0e-58 230.3 160 70.6
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.3e-58 229.9 157 72.0
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 1.8e-58 229.6 143 73.4
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 3.0e-58 228.8 163 69.3
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 3.9e-58 228.4 144 71.5
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 6.7e-58 227.6 147 76.2
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 2.5e-57 225.7 163 68.1
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 3.3e-57 225.3 158 71.5
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 4.3e-57 224.9 155 72.3
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 7.4e-57 224.2 146 73.3
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 9.6e-57 223.8 143 74.1
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 1.3e-56 223.4 143 69.9
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 2.1e-56 222.6 151 70.2
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 2.1e-56 222.6 146 73.3
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 2.8e-56 222.2 155 71.6
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 6.3e-56 221.1 146 71.2
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 6.3e-56 221.1 146 69.2
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 8.2e-56 220.7 146 71.2
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 8.2e-56 220.7 146 71.2
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 8.2e-56 220.7 155 68.4
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 1.1e-55 220.3 157 68.2
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 1.1e-55 220.3 144 72.2
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 1.4e-55 219.9 144 72.9
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.8e-55 219.5 159 69.8
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 2.4e-55 219.2 147 70.7
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 9.0e-55 217.2 146 69.9
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 9.0e-55 217.2 146 69.9
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 9.0e-55 217.2 146 69.9
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 1.5e-54 216.5 157 68.8
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.5e-54 216.5 150 70.0
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 1.5e-54 216.5 141 69.5
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 2.0e-54 216.1 147 70.7
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 2.6e-54 215.7 157 68.8
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 5.9e-54 214.5 153 70.6
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 7.6e-54 214.2 144 69.4
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 1.0e-53 213.8 148 64.2
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 1.3e-53 213.4 158 65.2
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 1.7e-53 213.0 146 70.5
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 2.2e-53 212.6 146 68.5
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 2.9e-53 212.2 146 67.1
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 5.0e-53 211.5 144 70.1
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 5.0e-53 211.5 154 64.3
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 8.4e-53 210.7 154 67.5
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.4e-52 209.9 143 69.2
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 1.4e-52 209.9 165 66.1
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 4.2e-52 208.4 148 67.6
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 5.5e-52 208.0 156 62.8
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 2.7e-51 205.7 132 75.0
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 4.6e-51 204.9 144 67.4
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 6.1e-51 204.5 145 63.4
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 1.8e-50 203.0 141 67.4
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 3.0e-50 202.2 156 66.7
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 3.0e-50 202.2 139 69.1
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 1.5e-49 199.9 156 64.7
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 4.3e-49 198.4 140 66.4
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 5.7e-49 198.0 142 64.8
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 5.7e-49 198.0 143 65.0
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 9.7e-49 197.2 139 71.9
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 9.7e-49 197.2 153 61.4
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 1.6e-48 196.4 149 63.1
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 8.2e-48 194.1 143 65.7
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 5.9e-46 188.0 143 65.7
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 8.5e-45 184.1 138 65.9
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 1.1e-44 183.7 156 60.9
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 4.2e-44 181.8 138 65.2
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 3.9e-42 175.3 134 56.7
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.3e-40 170.2 139 60.4
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 1.3e-40 170.2 148 56.8
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 1.1e-39 167.2 148 56.8
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 1.4e-39 166.8 142 57.7
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 9.1e-39 164.1 157 56.1
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 1.4e-36 156.8 135 51.9
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 7.9e-35 151.0 134 53.7
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 1.4e-34 150.2 149 53.7
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 1.8e-34 149.8 133 54.9
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 5.1e-34 148.3 108 65.7
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 5.7e-33 144.8 133 51.1
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 3.7e-32 142.1 149 48.3
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 2.4e-31 139.4 133 53.4
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 2.0e-30 136.3 100 69.0
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 3.5e-30 135.6 96 65.6
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 1.0e-29 134.0 98 69.4
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.3e-29 133.7 154 50.0
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 4.2e-28 128.6 103 63.1
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 8.8e-26 120.9 139 48.9
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 1.1e-25 120.6 143 46.2
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 3.6e-19 99.0 112 46.4
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 6.1e-19 98.2 158 39.2
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 5.2e-18 95.1 103 50.5
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 3.4e-17 92.4 87 55.2
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 6.3e-16 88.2 74 62.2
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 2.4e-15 86.3 157 35.0
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 5.5e-12 75.1 102 43.1


User provided reference genes

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