Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 2.8e-76 288.5 142 100.0
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 7.1e-72 273.9 142 93.7
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 9.6e-69 263.5 142 90.8
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 8.4e-65 250.4 142 87.3
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 2.9e-49 198.7 137 70.1
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 5.0e-49 198.0 130 76.2
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.7e-46 187.6 130 71.5
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.7e-46 187.6 130 71.5
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.5e-45 186.4 130 71.5
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.0e-45 186.0 130 70.8
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 9.7e-45 183.7 131 68.7
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-42 176.8 132 65.9
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-42 176.8 132 67.4
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-42 176.0 132 65.9
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 3.8e-41 171.8 133 63.9
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 3.8e-41 171.8 132 62.1
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 8.5e-41 170.6 129 65.1
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-40 169.9 135 62.2
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 3.2e-40 168.7 135 61.5
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 4.2e-40 168.3 129 64.3
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 4.2e-40 168.3 132 64.4
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 7.2e-40 167.5 129 63.6
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-39 166.4 132 63.6
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-39 166.4 132 62.1
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-39 166.4 135 62.2
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-39 165.6 132 65.2
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-37 160.2 132 59.1
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.5e-37 159.8 134 64.2
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 2.0e-37 159.5 135 55.6
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.6e-37 159.1 134 65.7
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 9.7e-37 157.1 132 59.1
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 1.3e-36 156.8 135 61.5
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-35 153.3 132 56.8
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-35 152.9 132 60.6
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.1e-35 152.1 132 59.8
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 4.1e-35 151.8 134 62.7
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 7.0e-35 151.0 132 59.1
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 9.1e-35 150.6 133 60.9
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.9e-34 147.9 104 72.1
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.2e-33 146.0 133 61.7
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 2.9e-33 145.6 130 55.4
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 2.9e-33 145.6 130 55.4
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.1e-32 143.7 110 65.5
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 3.2e-32 142.1 133 57.9
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-31 140.2 132 59.8
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 3.6e-31 138.7 132 47.0
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 4.7e-31 138.3 132 59.1
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 4.7e-31 138.3 130 57.7
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 8.0e-31 137.5 131 55.0
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 8.0e-31 137.5 131 55.0
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 1.0e-30 137.1 130 56.9
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.0e-30 137.1 132 59.1
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-30 136.7 130 51.5
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 1.8e-30 136.3 104 66.3
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 2.3e-30 136.0 137 52.6
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 5.2e-30 134.8 132 57.6
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 5.2e-30 134.8 132 57.6
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 5.2e-30 134.8 135 58.5
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 5.2e-30 134.8 132 57.6
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 8.8e-30 134.0 117 56.4
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-29 133.7 130 56.9
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.0e-29 132.9 134 51.5
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 2.6e-29 132.5 135 54.8
Thhalv10002936m.g Eutrema salsugineum HOM05D007540 ORTHO05D009531 4.4e-29 131.7 111 59.5
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 9.7e-29 130.6 134 52.2
CARHR180470 Cardamine hirsuta HOM05D007540 ORTHO05D009531 4.8e-28 128.3 92 65.2
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-27 127.1 131 58.0
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.4e-27 126.7 89 65.2
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 2.4e-27 125.9 133 47.4
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 5.3e-27 124.8 130 52.3
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.6e-26 123.2 130 49.2
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.6e-26 123.2 133 51.9
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 3.5e-26 122.1 128 48.4
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.9e-25 119.0 113 54.0
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.1e-24 117.1 137 46.7
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 3.2e-24 115.5 135 48.9
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 4.4e-21 105.1 132 44.7
CARHR180370 Cardamine hirsuta HOM05D007540 ORTHO05D009531 4.4e-21 105.1 78 67.9
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 2.2e-20 102.8 134 42.5
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 3.7e-20 102.1 76 65.8
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 6.3e-20 101.3 137 42.3
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 6.3e-20 101.3 140 39.3
C02p23290 Brassica napus HOM05D007540 ORTHO05D009531 1.4e-19 100.1 117 45.3
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 1.8e-19 99.8 140 38.6
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 3.5e-18 95.5 134 41.0
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 3.5e-18 95.5 134 41.0
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-17 94.0 100 45.0
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-17 94.0 124 41.1
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.7e-17 93.2 128 44.5
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 2.5e-16 89.4 136 39.0
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 2.8e-15 85.9 90 52.2
SalBow1G0974 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.8e-15 85.9 64 62.5
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 3.4e-13 79.0 116 36.2
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 3.1e-11 72.4 55 63.6
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 7.0e-11 71.2 55 63.6
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 4.5e-10 68.6 63 50.8
AL3G46820 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 1.1e-08 63.9 81 44.4
BcaC03g14860 Brassica carinata HOM05D007540 ORTHO05D009531 6.1e-07 58.2 50 58.0
BcaB01g02552 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-06 57.0 32 78.1
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 1.4e-06 57.0 142 34.5


User provided reference genes

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