Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2771 Cannabis sativa HOM05D006927 ORTHO05D009065 1.2e-171 606.3 290 100.0
GSVIVG01019324001 Vitis vinifera HOM05D006927 ORTHO05D009065 1.3e-117 426.8 283 71.7
Potri.013G070700 Populus trichocarpa HOM05D006927 ORTHO05D009065 9.6e-116 420.6 280 70.4
QL04p053394 Quercus lobata HOM05D006927 ORTHO05D009065 1.3e-115 420.2 316 66.5
Gorai.007G250200 Gossypium raimondii HOM05D006927 ORTHO05D009065 1.6e-115 419.9 285 68.8
Thecc.05G234500 Theobroma cacao HOM05D006927 ORTHO05D009065 3.7e-115 418.7 283 69.3
Dinv43961 Davidia involucrata HOM05D006927 ORTHO05D009065 4.8e-115 418.3 281 69.0
Carub.0006s1591 Capsella rubella HOM05D006927 ORTHO05D009065 4.0e-114 415.2 306 65.7
Gohir.A11G224222 Gossypium hirsutum HOM05D006927 ORTHO05D009065 4.0e-114 415.2 285 68.1
Eucgr.D01080 Eucalyptus grandis HOM05D006927 ORTHO05D009065 2.0e-113 412.9 279 69.9
Duzib177G0162 Durio zibethinus HOM05D006927 ORTHO05D009065 2.6e-113 412.5 285 68.1
CSS0044270 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 3.4e-113 412.1 282 69.1
Manes.09G133500 Manihot esculenta HOM05D006927 ORTHO05D009065 3.4e-113 412.1 284 69.0
CSS0031880 Camellia sinensis var. sinensis HOM05D006927 ORTHO05D009065 4.5e-113 411.8 282 68.8
BcaC03g13532 Brassica carinata HOM05D006927 ORTHO05D009065 5.8e-113 411.4 302 66.2
Sp6g26550 Schrenkiella parvula HOM05D006927 ORTHO05D009065 1.3e-112 410.2 284 68.0
Ciclev10032190m.g Citrus clementina HOM05D006927 ORTHO05D009065 1.7e-112 409.8 281 69.8
Lj1g0006598 Lotus japonicus HOM05D006927 ORTHO05D009065 1.7e-112 409.8 284 69.7
arahy.Tifrunner.gnm1.ann1.DTN3WJ Arachis hypogaea HOM05D006927 ORTHO05D009065 2.9e-112 409.1 279 69.9
Prupe.2G106800 Prunus persica HOM05D006927 ORTHO05D009065 3.8e-112 408.7 284 67.3
A02p04400 Brassica napus HOM05D006927 ORTHO05D009065 4.9e-112 408.3 305 66.2
AL6G28760 Arabidopsis lyrata HOM05D006927 ORTHO05D009065 1.9e-111 406.4 313 63.9
THA.LOC104820815 Tarenaya hassleriana HOM05D006927 ORTHO05D009065 1.9e-111 406.4 315 63.5
AT5G17670 Arabidopsis thaliana HOM05D006927 ORTHO05D009065 3.2e-111 405.6 308 64.6
arahy.Tifrunner.gnm1.ann1.A7PVHI Arachis hypogaea HOM05D006927 ORTHO05D009065 4.2e-111 405.2 279 69.2
FvH4_7g08340 Fragaria vesca HOM05D006927 ORTHO05D009065 4.2e-111 405.2 285 66.3
Atru.chr2.1634 Acer truncatum HOM05D006927 ORTHO05D009065 7.1e-111 404.4 310 64.2
Cc02_g26470 Coffea canephora HOM05D006927 ORTHO05D009065 7.1e-111 404.4 279 68.1
Cpa.g.sc73.27 Carica papaya HOM05D006927 ORTHO05D009065 9.3e-111 404.1 285 68.1
FAN03G0521 Fragaria x ananassa HOM05D006927 ORTHO05D009065 9.3e-111 404.1 285 66.7
RcHm_v2.0_Chr1g0340711 Rosa chinensis HOM05D006927 ORTHO05D009065 9.3e-111 404.1 294 65.3
CsaV3_6G006390 Cucumis sativus L. HOM05D006927 ORTHO05D009065 1.2e-110 403.7 299 64.9
Lsat_1_v5_gn_1_89341 Lactuca sativa HOM05D006927 ORTHO05D009065 1.2e-110 403.7 303 64.4
TWI34G1327 Tripterygium wilfordii HOM05D006927 ORTHO05D009065 1.6e-110 403.3 284 68.3
DCAR_001906 Daucus carota HOM05D006927 ORTHO05D009065 2.1e-110 402.9 280 67.1
TPR.G38566 Trifolium pratense HOM05D006927 ORTHO05D009065 2.7e-110 402.5 280 68.9
C02p09230 Brassica napus HOM05D006927 ORTHO05D009065 3.5e-110 402.1 310 65.2
Sc11g0005590 Simmondsia chinensis HOM05D006927 ORTHO05D009065 4.6e-110 401.7 281 68.3
VMungo0251G3349 Vigna mungo HOM05D006927 ORTHO05D009065 4.6e-110 401.7 285 68.1
Thhalv10014137m.g Eutrema salsugineum HOM05D006927 ORTHO05D009065 7.9e-110 401.0 303 63.4
TAR629G3441 Trochodendron aralioides HOM05D006927 ORTHO05D009065 1.3e-109 400.2 275 69.1
Aqoxy1G00986 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 1.8e-109 399.8 321 61.4
Ah.16g104050 Amaranthus hybridus HOM05D006927 ORTHO05D009065 3.9e-109 398.7 274 67.9
MELO3C022480.2 Cucumis melo HOM05D006927 ORTHO05D009065 3.9e-109 398.7 296 64.9
Rhsim07G0047700 Rhododendron simsii HOM05D006927 ORTHO05D009065 1.1e-108 397.1 327 60.6
ECA248G1152 Erigeron canadensis HOM05D006927 ORTHO05D009065 1.9e-108 396.4 274 66.1
Migut.B01420 Erythranthe guttata HOM05D006927 ORTHO05D009065 2.5e-108 396.0 281 64.4
Sed0018978 Sechium edule HOM05D006927 ORTHO05D009065 2.5e-108 396.0 285 66.0
Nitab4.5_0000792g0130 Nicotiana tabacum HOM05D006927 ORTHO05D009065 3.3e-108 395.6 300 63.3
Phvul.002G317100 Phaseolus vulgaris HOM05D006927 ORTHO05D009065 3.3e-108 395.6 279 67.4
SalBow5G1207 Salvia bowleyana HOM05D006927 ORTHO05D009065 4.3e-108 395.2 304 62.2
Haze_15787 Corylus avellana HOM05D006927 ORTHO05D009065 7.4e-108 394.4 286 66.8
FAN10G1940 Fragaria x ananassa HOM05D006927 ORTHO05D009065 9.6e-108 394.0 293 64.2
PGR083G0610 Punica granatum HOM05D006927 ORTHO05D009065 1.3e-107 393.7 287 66.6
Solyc01g081480.3 Solanum lycopersicum HOM05D006927 ORTHO05D009065 1.3e-107 393.7 280 67.5
Medtr3g118320 Medicago truncatula HOM05D006927 ORTHO05D009065 1.6e-107 393.3 287 65.5
FAN06G3009 Fragaria x ananassa HOM05D006927 ORTHO05D009065 2.8e-107 392.5 303 62.0
Peaxi162Scf00907g00025 Petunia axillaris HOM05D006927 ORTHO05D009065 2.8e-107 392.5 301 63.5
Nitab4.5_0006785g0060 Nicotiana tabacum HOM05D006927 ORTHO05D009065 3.7e-107 392.1 318 61.3
HanXRQChr01g0018481 Helianthus annuus HOM05D006927 ORTHO05D009065 6.3e-107 391.3 285 64.6
PGSC0003DMG400031110 Solanum tuberosum HOM05D006927 ORTHO05D009065 1.4e-106 390.2 280 66.8
Glyma.06G001500 Glycine max HOM05D006927 ORTHO05D009065 1.8e-106 389.8 284 67.6
MD07G1081500 Malus domestica HOM05D006927 ORTHO05D009065 1.8e-106 389.8 275 67.6
Sopen01g033040 Solanum pennellii HOM05D006927 ORTHO05D009065 4.1e-106 388.7 280 66.8
Lj9A617T58 Lonicera japonica HOM05D006927 ORTHO05D009065 1.5e-105 386.7 273 66.7
Aa31LG11G11960 Aethionema arabicum HOM05D006927 ORTHO05D009065 5.9e-105 384.8 332 58.7
Os02g0129900 Oryza sativa ssp. japonica HOM05D006927 ORTHO05D009065 5.9e-105 384.8 286 64.0
Zm00001eb208940 Zea mays HOM05D006927 ORTHO05D009065 1.0e-104 384.0 288 64.9
ATR0568G108 Amborella trichopoda HOM05D006927 ORTHO05D009065 8.5e-104 380.9 274 65.7
MBI04_g06278_MAGBIO Magnolia biondii HOM05D006927 ORTHO05D009065 8.5e-104 380.9 273 67.0
PSO675G5316 Papaver somniferum HOM05D006927 ORTHO05D009065 1.1e-103 380.6 329 59.3
Lalb_Chr08g0246751 Lupinus albus HOM05D006927 ORTHO05D009065 1.4e-103 380.2 300 60.3
CAN.G992.25 Capsicum annuum HOM05D006927 ORTHO05D009065 3.2e-103 379.0 302 62.6
ClCG06G000620 Citrullus lanatus HOM05D006927 ORTHO05D009065 1.6e-102 376.7 328 57.9
Ca_15418_v3 Cicer arietinum L. HOM05D006927 ORTHO05D009065 6.7e-101 371.3 278 64.7
COL.COLO4_21417 Corchorus olitorius HOM05D006927 ORTHO05D009065 1.3e-99 367.1 268 66.0
vmacro13598 Vaccinium macrocarpon HOM05D006927 ORTHO05D009065 1.5e-97 360.1 388 49.0
SGA_v2.0_scaffold98G29375 Striga asiatica HOM05D006927 ORTHO05D009065 3.6e-94 349.0 284 59.2
CDE02G0279 Ceratophyllum demersum HOM05D006927 ORTHO05D009065 6.1e-94 348.2 282 60.3
AagrBONN_evm.TU.Sc2ySwM_228.4179 Anthoceros agrestis HOM05D006927 ORTHO05D009065 5.7e-92 341.7 303 55.4
FAN01G0804 Fragaria x ananassa HOM05D006927 ORTHO05D009065 6.5e-88 328.2 281 58.7
Mapoly0110s0034 Marchantia polymorpha HOM05D006927 ORTHO05D009065 5.5e-87 325.1 298 53.4
Pp3c20_10810 Physcomitrium patens HOM05D006927 ORTHO05D009065 2.1e-86 323.2 302 51.7
Sabra13G0061600 Salix brachista HOM05D006927 ORTHO05D009065 3.7e-83 312.4 322 52.8
Psat5g000960 Pisum sativum HOM05D006927 ORTHO05D009065 3.5e-81 305.8 222 67.6
MD02G1231900 Malus domestica HOM05D006927 ORTHO05D009065 2.2e-80 303.1 248 60.5
SMO141G0137 Selaginella moellendorffii HOM05D006927 ORTHO05D009065 5.0e-80 302.0 273 54.9
Dinv43521 Davidia involucrata HOM05D006927 ORTHO05D009065 1.3e-75 287.3 167 77.8
Nn1g09344 Nelumbo nucifera HOM05D006927 ORTHO05D009065 6.3e-75 285.0 166 76.5
BraA02t05404Z Brassica rapa HOM05D006927 ORTHO05D009065 2.0e-73 280.0 181 74.0
BolC2t06832H Brassica oleracea HOM05D006927 ORTHO05D009065 3.5e-73 279.3 162 80.2
Oeu034881.1 Olea europaea HOM05D006927 ORTHO05D009065 4.5e-73 278.9 184 69.6
CiPaw.02G047300 Carya illinoinensis HOM05D006927 ORTHO05D009065 1.0e-69 267.7 167 76.0
MCO09G674 Micromonas commoda HOM05D006927 ORTHO05D009065 3.0e-69 266.2 252 51.2
Cre07.g313550 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D009065 6.3e-67 258.5 259 46.7
Aqoxy116s007 Aquilegia oxysepala HOM05D006927 ORTHO05D009065 3.6e-62 242.7 226 55.3
Actinidia31733 Actinidia chinensis HOM05D006927 ORTHO05D009065 4.0e-61 239.2 177 64.4
PRCOL_00002784 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 2.8e-59 233.0 263 45.6
HPP92_025548 Vanilla planifolia HOM05D006927 ORTHO05D009065 1.6e-57 227.3 173 63.0
Gohir.D11G237100 Gossypium hirsutum HOM05D006927 ORTHO05D009065 1.2e-52 211.1 122 76.2
CARHR195510 Cardamine hirsuta HOM05D006927 ORTHO05D009065 7.3e-47 191.8 162 57.4
unitig_26.g8847 Utricularia gibba HOM05D006927 ORTHO05D009065 4.7e-46 189.1 151 59.6
MCO02G275 Micromonas commoda HOM05D006927 ORTHO05D044296 1.2e-33 147.9 293 33.1
PRCOL_00000683 Prasinoderma coloniale HOM05D006927 ORTHO05D009065 6.6e-32 142.1 284 34.9
unitig_26.g8846 Utricularia gibba HOM05D006927 ORTHO05D009065 5.6e-31 139.0 73 78.1
Cre01.g025150 Chlamydomonas reinhardtii HOM05D006927 ORTHO05D044296 2.1e-30 137.1 308 30.2
Actinidia34774 Actinidia chinensis HOM05D006927 ORTHO05D009065 2.6e-28 130.2 81 65.4
Thecc.05G234900 Theobroma cacao HOM05D006927 ORTHO05D009065 2.3e-24 117.1 60 83.3
SEGI_38351 Sequoiadendron giganteum HOM05D006927 ORTHO05D009065 5.1e-24 115.9 73 72.6
BcaB08g36753 Brassica carinata HOM05D006927 ORTHO05D009065 7.8e-17 92.0 64 65.6
AagrBONN_evm.TU.Sc2ySwM_368.1936 Anthoceros agrestis HOM05D006927 ORTHO05D071668 4.3e-15 86.3 207 28.5
HPP92_025520 Vanilla planifolia HOM05D006927 ORTHO05D009065 4.3e-15 86.3 132 43.9
PRCOL_00002844 Prasinoderma coloniale HOM05D006927 ORTHO05D049054 1.2e-12 78.2 131 36.6
CBR_g4745 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-09 67.8 65 46.2


User provided reference genes

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