Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 4.3e-141 504.6 245 100.0
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 2.8e-47 193.0 250 43.2
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 4.7e-47 192.2 251 44.2
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 6.1e-47 191.8 249 44.6
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 6.1e-47 191.8 249 42.2
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 1.8e-46 190.3 247 44.1
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 4.4e-45 185.7 252 44.0
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 9.8e-45 184.5 250 44.0
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.7e-44 183.7 247 43.3
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 2.2e-44 183.3 244 43.0
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 4.9e-44 182.2 252 41.7
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.1e-43 181.0 247 42.9
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 2.4e-43 179.9 247 42.9
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 5.4e-43 178.7 251 43.0
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 1.2e-42 177.6 275 40.0
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.6e-42 177.2 248 44.0
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 4.6e-42 175.6 248 41.9
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 5.9e-42 175.3 259 40.5
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 5.9e-42 175.3 249 43.8
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 7.8e-42 174.9 251 42.2
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 1.0e-41 174.5 247 41.7
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 6.6e-41 171.8 246 41.5
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 8.6e-41 171.4 251 41.8
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.1e-40 171.0 248 41.9
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 2.5e-40 169.9 247 40.9
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 1.6e-39 167.2 267 38.6
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.6e-39 167.2 249 41.4
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 2.8e-39 166.4 249 41.4
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 1.1e-38 164.5 249 44.2
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 2.3e-38 163.3 234 41.0
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 5.2e-38 162.2 249 40.2
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 5.2e-38 162.2 258 41.1
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 8.9e-38 161.4 266 37.2
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 7.5e-37 158.3 284 38.4
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 9.8e-37 157.9 238 40.8
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-36 156.4 249 40.6
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-36 156.4 249 40.6
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 2.0e-34 150.2 247 36.4
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 5.0e-33 145.6 249 37.8
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.9e-32 143.7 232 39.7
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 9.5e-32 141.4 244 38.5
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 2.1e-31 140.2 248 39.9
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 6.8e-30 135.2 255 36.9
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.5e-29 134.0 240 37.1
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.7e-28 130.6 221 37.6
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 7.8e-26 121.7 245 34.3
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 1.2e-23 114.4 265 32.8
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.1e-22 109.8 91 57.1
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 5.2e-22 109.0 236 34.3
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.3e-17 94.4 184 34.2
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 1.9e-16 90.5 75 56.0
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 2.5e-16 90.1 68 63.2
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 3.3e-16 89.7 186 36.0
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 9.6e-16 88.2 227 28.6
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 3.6e-15 86.3 80 57.5
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 6.2e-15 85.5 74 55.4
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 6.2e-15 85.5 103 48.5
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 8.1e-15 85.1 181 33.7
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 6.4e-12 75.5 47 70.2
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 6.4e-12 75.5 47 70.2
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 1.6e-10 70.9 144 35.4
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 1.1e-08 64.7 39 69.2


User provided reference genes

Program Settings