Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 5.2e-104 381.3 231 100.0
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 3.9e-51 205.7 153 68.0
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 6.6e-51 204.9 153 68.0
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 3.3e-50 202.6 155 67.1
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 3.3e-50 202.6 154 64.9
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 4.3e-50 202.2 154 66.2
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 1.2e-49 200.7 154 66.2
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 2.1e-49 199.9 152 62.5
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 2.8e-49 199.5 155 66.5
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 3.6e-49 199.1 154 66.9
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 4.7e-49 198.7 154 65.6
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 6.2e-49 198.4 154 65.6
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 8.1e-49 198.0 152 61.8
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 1.1e-48 197.6 154 62.3
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 1.8e-48 196.8 152 61.2
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 2.4e-48 196.4 153 65.4
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 3.1e-48 196.1 154 63.6
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 4.0e-48 195.7 154 64.9
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 5.2e-48 195.3 152 60.5
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 5.2e-48 195.3 152 60.5
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 5.2e-48 195.3 152 60.5
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 5.2e-48 195.3 152 65.8
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 6.8e-48 194.9 152 66.4
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 8.9e-48 194.5 152 59.9
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 8.9e-48 194.5 232 49.6
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 8.9e-48 194.5 154 64.3
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.2e-47 194.1 159 64.8
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 1.2e-47 194.1 155 61.9
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 1.5e-47 193.7 152 64.5
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 1.5e-47 193.7 152 59.9
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.5e-47 193.7 154 64.3
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 2.6e-47 193.0 152 59.9
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 2.6e-47 193.0 152 64.5
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 4.4e-47 192.2 152 63.8
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 5.8e-47 191.8 219 51.1
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 5.8e-47 191.8 152 60.5
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 2.9e-46 189.5 152 60.5
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 4.9e-46 188.7 155 63.2
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 8.4e-46 188.0 154 62.3
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 8.4e-46 188.0 153 62.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 1.1e-45 187.6 158 62.7
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 1.4e-45 187.2 152 59.9
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.4e-45 187.2 173 57.2
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.4e-45 187.2 154 63.0
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 1.9e-45 186.8 151 61.6
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 2.4e-45 186.4 153 60.1
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 3.2e-45 186.0 152 60.5
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 7.1e-45 184.9 170 59.4
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 7.1e-45 184.9 153 61.4
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.6e-44 183.7 165 57.6
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 1.6e-44 183.7 163 59.5
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 1.6e-44 183.7 215 48.8
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.1e-44 183.3 159 61.6
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 3.5e-44 182.6 154 62.3
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 3.5e-44 182.6 160 60.0
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 3.5e-44 182.6 161 60.9
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 4.6e-44 182.2 160 58.8
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 4.6e-44 182.2 217 48.8
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 1.0e-43 181.0 229 46.7
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 2.3e-43 179.9 229 44.5
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 3.0e-43 179.5 152 56.6
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 3.9e-43 179.1 223 48.0
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 3.9e-43 179.1 223 48.0
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 5.1e-43 178.7 154 60.4
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 1.9e-42 176.8 229 44.1
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 1.9e-42 176.8 145 61.4
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 2.5e-42 176.4 141 61.7
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 3.3e-42 176.0 231 47.2
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 3.3e-42 176.0 157 58.6
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 3.3e-42 176.0 157 58.6
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 9.6e-42 174.5 234 46.2
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 2.8e-41 172.9 154 62.3
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 3.6e-41 172.6 145 58.6
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 5.3e-40 168.7 144 61.1
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 2.0e-39 166.8 127 63.8
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 2.0e-39 166.8 213 44.6
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 7.6e-39 164.9 116 70.7
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 3.8e-38 162.5 149 57.7
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 8.4e-38 161.4 154 54.5
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 1.1e-37 161.0 149 58.4
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 4.2e-37 159.1 133 58.6
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 5.4e-37 158.7 154 53.2
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.2e-36 157.5 119 67.2
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 4.6e-36 155.6 230 41.3
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 2.3e-35 153.3 112 68.8
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 5.6e-34 148.7 213 47.9
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 9.6e-34 147.9 113 65.5
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 1.8e-32 143.7 110 63.6
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 6.9e-32 141.7 118 60.2
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 6.9e-32 141.7 153 51.0
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 2.9e-30 136.3 160 49.4
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.1e-29 134.4 213 45.5
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 2.1e-20 103.6 104 57.7
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 9.6e-18 94.7 146 38.4
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 4.8e-17 92.4 146 39.0
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 8.2e-17 91.7 145 40.7
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 4.5e-15 85.9 79 59.5
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 6.0e-12 75.5 147 32.7
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 1.8e-11 73.9 66 54.5


User provided reference genes

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