Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 8.0e-68 260.4 140 100.0
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 7.6e-50 200.7 142 73.2
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.6e-47 193.0 142 72.5
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 2.1e-47 192.6 142 73.2
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.1e-47 192.6 142 72.5
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.1e-47 192.6 142 72.5
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 2.1e-47 192.6 147 69.4
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 7.8e-47 190.7 139 69.8
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 1.0e-46 190.3 145 69.0
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 1.7e-46 189.5 137 72.3
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 5.1e-46 188.0 139 73.4
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 1.5e-45 186.4 140 69.3
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 2.5e-45 185.7 144 67.4
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 2.5e-45 185.7 140 69.3
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 5.6e-45 184.5 137 71.5
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 4.7e-44 181.4 145 66.9
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 5.2e-43 177.9 129 73.6
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 6.9e-43 177.6 143 69.2
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 6.9e-43 177.6 142 66.9
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 1.5e-42 176.4 140 67.1
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 1.5e-42 176.4 140 67.1
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.6e-42 175.6 142 66.2
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 5.8e-42 174.5 94 86.2
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 9.9e-42 173.7 133 69.2
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 2.9e-41 172.2 128 65.6
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 3.8e-41 171.8 94 88.3
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 4.9e-41 171.4 131 68.7
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 6.4e-41 171.0 132 68.9
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 8.4e-41 170.6 94 87.2
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 1.4e-40 169.9 140 66.4
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 1.4e-40 169.9 95 85.3
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 1.4e-40 169.9 144 68.1
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 1.9e-40 169.5 141 64.5
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 2.4e-40 169.1 131 69.5
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 2.4e-40 169.1 119 73.1
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.4e-40 169.1 144 61.8
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 4.2e-40 168.3 139 64.0
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 5.4e-40 167.9 134 65.7
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 9.3e-40 167.2 144 66.0
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.2e-39 166.8 130 70.0
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 2.1e-39 166.0 144 65.3
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.1e-39 166.0 95 80.0
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 2.7e-39 165.6 140 62.1
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 2.7e-39 165.6 94 84.0
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 4.6e-39 164.9 108 73.1
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.7e-38 162.9 95 81.1
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 3.9e-38 161.8 142 62.0
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 5.1e-38 161.4 134 67.2
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 6.6e-38 161.0 107 78.5
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.5e-37 159.1 143 60.1
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 4.3e-37 158.3 116 67.2
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 5.6e-37 157.9 143 62.9
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 5.6e-37 157.9 118 71.2
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 1.3e-36 156.8 136 60.3
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 1.3e-36 156.8 119 68.1
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 2.1e-36 156.0 132 61.4
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.1e-36 156.0 142 59.2
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 1.4e-35 153.3 92 78.3
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 1.8e-35 152.9 116 67.2
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 3.1e-35 152.1 117 65.8
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 5.3e-35 151.4 118 66.1
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 6.9e-35 151.0 96 75.0
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 6.9e-35 151.0 95 74.7
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 9.0e-35 150.6 92 76.1
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 9.0e-35 150.6 115 63.5
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 1.5e-34 149.8 93 77.4
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 1.5e-34 149.8 112 75.0
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 2.0e-34 149.4 94 75.5
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 9.9e-34 147.1 92 75.0
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 9.9e-34 147.1 92 75.0
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 9.9e-34 147.1 119 65.5
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.7e-33 146.4 155 57.4
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 4.9e-33 144.8 94 73.4
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 1.1e-32 143.7 124 64.5
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.1e-32 143.7 95 72.6
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 4.2e-32 141.7 96 72.9
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 5.4e-32 141.4 93 73.1
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 7.1e-32 141.0 128 56.2
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 7.1e-32 141.0 92 70.7
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 1.2e-31 140.2 95 69.5
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 1.6e-31 139.8 112 65.2
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 1.0e-30 137.1 126 57.9
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 1.3e-30 136.7 95 67.4
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 3.0e-30 135.6 113 64.6
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 5.1e-30 134.8 91 64.8
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 6.7e-30 134.4 91 70.3
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.5e-29 133.3 120 58.3
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.9e-29 132.9 110 62.7
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 1.9e-29 132.9 124 64.5
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.3e-28 130.2 114 57.9
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 8.1e-28 127.5 69 85.5
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.8e-27 126.3 121 61.2
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 1.5e-26 123.2 95 58.9
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 2.6e-26 122.5 88 60.2
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 7.6e-26 120.9 64 84.4
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 2.9e-25 119.0 70 74.3
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.9e-24 116.3 65 78.5
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 3.2e-24 115.5 92 60.9
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 4.2e-24 115.2 114 54.4
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 2.3e-22 109.4 90 56.7
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 2.4e-19 99.4 69 66.7
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 4.0e-19 98.6 93 59.1
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 8.7e-14 80.9 53 69.8
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 3.3e-13 79.0 109 39.4
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 1.3e-12 77.0 41 82.9
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 8.5e-09 64.3 74 55.4
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 1.4e-08 63.5 94 44.7


User provided reference genes

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