Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2479 Cannabis sativa HOM05D003331 ORTHO05D003264 1.3e-88 329.7 175 100.0
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 7.1e-13 78.2 185 36.2
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 1.6e-12 77.0 179 36.9
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 4.6e-12 75.5 189 36.0
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 6.0e-12 75.1 183 35.5
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 1.7e-11 73.6 178 38.2
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.0e-11 72.8 185 36.2
Gohir.A11G172900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 5.1e-11 72.0 185 35.7
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 5.1e-11 72.0 185 36.2
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 6.6e-11 71.6 189 34.9
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 8.6e-11 71.2 182 36.3
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 1.1e-10 70.9 188 34.6
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 4.3e-10 68.9 170 37.6
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 4.3e-10 68.9 208 33.7
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 7.3e-10 68.2 200 34.0
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 3.6e-09 65.9 166 36.7
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 4.7e-09 65.5 185 36.2
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 4.7e-09 65.5 197 33.0
THA.LOC104819740 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 6.2e-09 65.1 187 34.8
Sabra05G0089800 Salix brachista HOM05D003331 ORTHO05D003264 8.1e-09 64.7 212 33.0
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 1.1e-08 64.3 184 35.9
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 1.4e-08 63.9 181 34.3
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.4e-08 63.9 190 33.2
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 1.8e-08 63.5 178 33.7
Lalb_Chr09g0321511 Lupinus albus HOM05D003331 ORTHO05D003264 3.1e-08 62.8 191 34.6
Gohir.D05G187300 Gossypium hirsutum HOM05D003331 ORTHO05D003264 4.0e-08 62.4 190 32.6
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 4.0e-08 62.4 195 33.8
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 5.2e-08 62.0 175 34.3
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 8.9e-08 61.2 170 34.7
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 8.9e-08 61.2 181 33.1
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.5e-07 60.5 178 34.8
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.0e-07 60.1 171 33.9
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 2.0e-07 60.1 176 35.8
Cpa.g.sc26.287 Carica papaya HOM05D003331 ORTHO05D003264 2.6e-07 59.7 195 33.3
Lalb_Chr16g0377411 Lupinus albus HOM05D003331 ORTHO05D003264 2.6e-07 59.7 188 34.0
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 2.6e-07 59.7 197 33.0
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 2.6e-07 59.7 173 34.7
C07p61400 Brassica napus HOM05D003331 ORTHO05D003264 4.4e-07 58.9 208 33.2
CARHR108160 Cardamine hirsuta HOM05D003331 ORTHO05D003264 4.4e-07 58.9 173 35.3
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 4.4e-07 58.9 198 34.3
ECA232G3395 Erigeron canadensis HOM05D003331 ORTHO05D003264 5.8e-07 58.5 187 33.2
Thhalv10025822m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 5.8e-07 58.5 209 32.1
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 5.8e-07 58.5 171 33.9
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 5.8e-07 58.5 204 31.9
Ah.03g143180 Amaranthus hybridus HOM05D000531 ORTHO05D003264 7.6e-07 58.2 183 33.3
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 7.6e-07 58.2 188 33.5
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 9.9e-07 57.8 199 31.2
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 9.9e-07 57.8 217 31.3
C03p80970 Brassica napus HOM05D003331 ORTHO05D003264 1.3e-06 57.4 195 33.3
BolC3t20356H Brassica oleracea HOM05D003331 ORTHO05D003264 1.3e-06 57.4 195 33.3
BcaC01g00527 Brassica carinata HOM05D003331 ORTHO05D003264 1.7e-06 57.0 195 33.3
BcaNung00784 Brassica carinata HOM05D003331 ORTHO05D003264 1.7e-06 57.0 197 33.5
BolC7t46566H Brassica oleracea HOM05D003331 ORTHO05D003264 1.7e-06 57.0 208 33.2
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.2e-06 56.6 115 39.1
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 2.2e-06 56.6 174 35.1
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 2.9e-06 56.2 165 35.2
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 2.9e-06 56.2 180 32.8
C01p03140 Brassica napus HOM05D003331 ORTHO05D003264 3.8e-06 55.8 197 33.0
CANSAT01G0941 Cannabis sativa HOM05D003331 ORTHO05D003264 3.8e-06 55.8 198 31.3
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 3.8e-06 55.8 113 39.8
EL10Ac6g15165 Beta vulgaris HOM05D003331 ORTHO05D003264 6.4e-06 55.1 187 31.6
PGR031G1921 Punica granatum HOM05D003331 ORTHO05D003264 6.4e-06 55.1 192 32.3


User provided reference genes

Program Settings