Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2395 Cannabis sativa HOM05D004095 ORTHO05D003197 2.4e-165 585.9 410 100.0
CANSAT11G2253 Cannabis sativa HOM05D004095 ORTHO05D003197 4.5e-18 96.7 89 52.8
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.4e-16 91.7 282 27.3
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 4.2e-16 90.1 425 26.1
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 2.7e-15 87.4 415 24.3
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 1.4e-14 85.1 423 27.0
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 3.9e-14 83.6 82 45.1
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 5.1e-14 83.2 290 27.9
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 5.1e-14 83.2 301 26.9
TWI36G1615 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 5.1e-14 83.2 283 25.8
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 8.8e-14 82.4 423 26.0
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 1.5e-13 81.6 413 32.2
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.6e-13 80.9 424 26.4
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 2.6e-13 80.9 411 24.8
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 3.3e-13 80.5 73 52.1
vmacro07570 Vaccinium macrocarpon HOM05D004095 ORTHO05D003197 4.4e-13 80.1 92 40.2
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 7.4e-13 79.3 414 24.4
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 4.8e-12 76.6 304 26.6
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 4.8e-12 76.6 83 41.0
Prupe.1G362500 Prunus persica HOM05D004095 ORTHO05D003197 4.8e-12 76.6 297 24.9
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 8.2e-12 75.9 81 44.4
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 8.2e-12 75.9 414 24.4
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 1.1e-11 75.5 83 43.4
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 1.1e-11 75.5 278 24.8
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 1.8e-11 74.7 84 42.9
QL02p012206 Quercus lobata HOM05D004095 ORTHO05D003197 2.4e-11 74.3 81 43.2
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 4.1e-11 73.6 280 23.6
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 4.1e-11 73.6 416 24.5
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 4.1e-11 73.6 423 23.2
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 1.2e-10 72.0 282 25.9
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 1.6e-10 71.6 417 23.3
PGR031G2559 Punica granatum HOM05D004095 ORTHO05D003197 1.6e-10 71.6 84 39.3
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 2.0e-10 71.2 412 23.5
Gorai.008G208400 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.6e-10 70.9 76 40.8
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 2.6e-10 70.9 410 23.9
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 3.5e-10 70.5 289 26.3
Gohir.D12G193466 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.5e-10 70.1 74 41.9
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 5.9e-10 69.7 83 38.6
RcHm_v2.0_Chr6g0303321 Rosa chinensis HOM05D004095 ORTHO05D003197 7.7e-10 69.3 92 40.2
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 7.7e-10 69.3 283 29.7
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 1.0e-09 68.9 290 24.5
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 1.0e-09 68.9 421 24.7
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 1.7e-09 68.2 421 21.9
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 1.7e-09 68.2 82 41.5
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 2.2e-09 67.8 426 23.7
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 2.2e-09 67.8 83 37.3
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 2.9e-09 67.4 78 41.0
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 3.8e-09 67.0 421 23.0
PSO675G0587 Papaver somniferum HOM05D004095 ORTHO05D003197 3.8e-09 67.0 83 37.3
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 5.0e-09 66.6 96 36.5
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 6.5e-09 66.2 78 43.6
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 8.5e-09 65.9 421 22.8
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 1.1e-08 65.5 417 23.0
Gohir.D01G096700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 1.5e-08 65.1 76 44.7
Gorai.002G122400 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.5e-08 65.1 76 44.7
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 1.5e-08 65.1 286 24.8
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 1.5e-08 65.1 420 24.5
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 1.9e-08 64.7 421 23.8
Lj4A799T84 Lonicera japonica HOM05D004095 ORTHO05D003197 1.9e-08 64.7 69 44.9
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 1.9e-08 64.7 419 23.6
FvH4_2g38160 Fragaria vesca HOM05D004095 ORTHO05D003197 3.2e-08 63.9 80 40.0
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 3.2e-08 63.9 80 38.8
FAN20G0678 Fragaria x ananassa HOM05D004095 ORTHO05D003197 3.2e-08 63.9 80 38.8
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 4.2e-08 63.5 75 40.0
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 4.2e-08 63.5 76 42.1
Gorai.008G131100 Gossypium raimondii HOM05D004095 ORTHO05D003197 4.2e-08 63.5 76 38.2
Phvul.001G004700 Phaseolus vulgaris HOM05D013708 ORTHO05D003197 5.5e-08 63.2 85 35.3
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 5.5e-08 63.2 85 35.3
Gohir.A01G110100 Gossypium hirsutum HOM05D004095 ORTHO05D003197 7.2e-08 62.8 76 42.1
Glyma.14G220400 Glycine max HOM05D013708 ORTHO05D003197 9.4e-08 62.4 84 34.5
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 9.4e-08 62.4 418 30.6
Sc15g0004790 Simmondsia chinensis HOM05D004095 ORTHO05D003197 1.2e-07 62.0 422 25.6
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 1.6e-07 61.6 84 34.5
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 2.7e-07 60.8 94 35.1
HPP92_007327 Vanilla planifolia HOM05D004095 ORTHO05D003197 2.7e-07 60.8 88 36.4
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 3.6e-07 60.5 76 36.8
Potri.005G242400 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.6e-07 60.5 417 23.3
TWI34G0261 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 3.6e-07 60.5 82 40.2
Ciclev10025767m.g Citrus clementina HOM05D004095 ORTHO05D003197 4.7e-07 60.1 74 32.4
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 4.7e-07 60.1 426 22.3
Thecc.02G059700 Theobroma cacao HOM05D015147 ORTHO05D003197 4.7e-07 60.1 80 36.2
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 4.7e-07 60.1 411 25.1
Glyma.17G259300 Glycine max HOM05D013708 ORTHO05D003197 6.1e-07 59.7 85 34.1
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.8e-06 58.2 421 22.6
BolC7t42868H Brassica oleracea HOM05D008819 ORTHO05D003197 2.3e-06 57.8 83 37.3
TPR.G32858 Trifolium pratense HOM05D013708 ORTHO05D003197 3.0e-06 57.4 83 34.9
TAR625G0988 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.0e-06 57.4 73 34.2
BcaC08g47079 Brassica carinata HOM05D008819 ORTHO05D003197 4.0e-06 57.0 81 37.0
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 5.2e-06 56.6 76 32.9
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 5.2e-06 56.6 416 22.8
BcaNung03339 Brassica carinata HOM05D008819 ORTHO05D003197 8.8e-06 55.8 83 37.3
C07p23350 Brassica napus HOM05D008819 ORTHO05D003197 8.8e-06 55.8 83 37.3
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 8.8e-06 55.8 81 38.3
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 8.8e-06 55.8 76 36.8


User provided reference genes

Program Settings