Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2390 Cannabis sativa HOM05D000003 ORTHO05D011611 1.7e-117 426.0 214 100.0
CANSAT54G1048 Cannabis sativa HOM05D000003 ORTHO05D000007 7.7e-46 188.0 231 42.9
CANSAT01G1392 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-41 174.1 250 38.4
CANSAT21G1545 Cannabis sativa HOM05D000003 ORTHO05D000007 5.7e-41 171.8 273 36.6
CANSAT01G0243 Cannabis sativa HOM05D000003 ORTHO05D000007 3.9e-37 159.1 274 35.4
CANSAT25G1254 Cannabis sativa HOM05D000003 ORTHO05D000007 3.3e-36 156.0 274 35.0
CANSAT65G0002 Cannabis sativa HOM05D000003 ORTHO05D000007 4.3e-36 155.6 267 36.3
CANSAT11G0526 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-35 154.1 258 34.9
CANSAT80G0090 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-34 151.0 263 35.4
CANSAT54G2202 Cannabis sativa HOM05D000003 ORTHO05D000007 8.9e-34 147.9 252 35.3
CANSAT01G1178 Cannabis sativa HOM05D000003 ORTHO05D000007 4.9e-32 142.1 210 32.4
CANSAT80G0416 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-22 110.2 211 37.4
Nitab4.5_0000151g0420 Nicotiana tabacum HOM05D000003 ORTHO05D011611 3.0e-21 106.3 197 34.5
CANSAT35G1564 Cannabis sativa HOM05D000003 ORTHO05D000007 1.1e-20 104.4 90 51.1
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 1.9e-20 103.6 161 36.6
EL10Ac4g09212 Beta vulgaris HOM05D000003 ORTHO05D000007 5.2e-18 95.5 230 26.1
EL10Ac6g14322 Beta vulgaris HOM05D000003 ORTHO05D000007 3.4e-17 92.8 236 26.7
CANSAT35G0705 Cannabis sativa HOM05D000003 ORTHO05D000007 5.8e-17 92.0 199 29.1
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 2.2e-16 90.1 265 23.0
Ah.12g063330 Amaranthus hybridus HOM05D000003 ORTHO05D000007 4.9e-16 89.0 217 27.2
CANSAT11G0988 Cannabis sativa HOM05D000003 ORTHO05D000007 6.4e-16 88.6 216 25.0
Ah.04g159630 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.4e-15 87.4 214 28.0
CANSAT01G0517 Cannabis sativa HOM05D000003 ORTHO05D000007 1.4e-15 87.4 200 27.0
CAN.G551.108 Capsicum annuum HOM05D002280 ORTHO05D011611 2.4e-15 86.7 112 34.8
CANSAT11G1056 Cannabis sativa HOM05D000003 ORTHO05D000007 4.1e-15 85.9 222 25.7
EL10Ac3g06546 Beta vulgaris HOM05D000003 ORTHO05D000007 7.1e-15 85.1 279 24.0
Nitab4.5_0003024g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000007 9.2e-15 84.7 217 28.1
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-14 84.3 236 27.1
CANSAT56G0142 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-14 84.3 245 23.7
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 1.6e-14 84.0 219 23.3
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 1.6e-14 84.0 222 25.2
EL10Ac5g11620 Beta vulgaris HOM05D000003 ORTHO05D000007 2.1e-14 83.6 223 24.2
Sopen07g022300 Solanum pennellii HOM05D000003 ORTHO05D000007 7.8e-14 81.6 240 25.4
CANSAT25G2441 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-13 81.3 249 26.9
CANSAT54G2889 Cannabis sativa HOM05D000003 ORTHO05D000006 1.0e-13 81.3 99 39.4
CANSAT78G1995 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-13 81.3 254 26.8
EL10Ac6g13827 Beta vulgaris HOM05D000003 ORTHO05D000007 1.3e-13 80.9 185 25.9
CAN.G1463.3 Capsicum annuum HOM05D000479 ORTHO05D000007 1.3e-13 80.9 89 36.0
Ah.12g061560 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.7e-13 80.5 197 26.9
EL10Ac7g17161 Beta vulgaris HOM05D000003 ORTHO05D000007 2.3e-13 80.1 136 30.1
Nitab4.5_0001519g0110 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.0e-13 79.7 90 38.9
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 5.1e-13 79.0 207 24.6
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 5.1e-13 79.0 246 25.2
Ah.14g080910 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.1e-12 77.8 205 24.4
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 1.1e-12 77.8 197 25.4
Hund31250 Selenicereus undatus HOM05D014118 ORTHO05D011611 1.1e-12 77.8 90 35.6
EL10Ac6g14081 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-12 77.4 89 34.8
EL10Ac9g22997 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-12 77.4 266 23.7
EL10Ac8g19445 Beta vulgaris HOM05D000003 ORTHO05D000007 1.9e-12 77.0 205 25.9
Ah.03g143450 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.5e-12 76.6 205 24.9
CANSAT78G1658 Cannabis sativa HOM05D000003 ORTHO05D000007 3.3e-12 76.3 244 23.0
AUR62043420 Chenopodium quinoa HOM05D000003 ORTHO05D000007 3.3e-12 76.3 185 29.7
EL10Ac8g19433 Beta vulgaris HOM05D000003 ORTHO05D000007 4.3e-12 75.9 266 23.7
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 4.3e-12 75.9 260 25.8
EL10Ac1g02104 Beta vulgaris HOM05D000003 ORTHO05D011611 1.2e-11 74.3 72 41.7
Peaxi162Scf00009g00121 Petunia axillaris HOM05D000003 ORTHO05D000007 1.2e-11 74.3 143 28.0
Dinv25855 Davidia involucrata HOM05D000003 ORTHO05D000007 1.6e-11 73.9 249 22.5
Nitab4.5_0000151g0430 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.6e-11 73.9 94 34.0
EL10Ac1g02040 Beta vulgaris HOM05D000003 ORTHO05D000007 2.1e-11 73.6 87 32.2
Dinv22485 Davidia involucrata HOM05D000003 ORTHO05D000007 2.1e-11 73.6 247 23.9
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 2.8e-11 73.2 224 25.4
Hund10169 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.8e-11 73.2 96 34.4
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 3.6e-11 72.8 231 22.9
EL10Ac6g13748 Beta vulgaris HOM05D000003 ORTHO05D000007 3.6e-11 72.8 95 30.5
CANSAT56G3914 Cannabis sativa HOM05D000024 ORTHO05D000006 4.7e-11 72.4 88 38.6
CANSAT54G2456 Cannabis sativa HOM05D000003 ORTHO05D000007 6.2e-11 72.0 251 24.7
EL10Ac3g06704 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-10 70.9 99 36.4
Dinv31264 Davidia involucrata HOM05D000003 ORTHO05D000007 1.4e-10 70.9 98 30.6
Ah.10g029790 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.8e-10 70.5 231 25.5
Dinv18035 Davidia involucrata HOM05D000003 ORTHO05D000006 1.8e-10 70.5 151 27.8
Lj3A1025T53 Lonicera japonica HOM05D000003 ORTHO05D000007 1.8e-10 70.5 195 24.1
CANSAT21G1657 Cannabis sativa HOM05D000003 ORTHO05D000007 2.4e-10 70.1 210 28.1
CANSAT80G1385 Cannabis sativa HOM05D000003 ORTHO05D000006 3.1e-10 69.7 154 30.5
Hund23554 Selenicereus undatus HOM05D000003 ORTHO05D011611 4.0e-10 69.3 88 35.2
EL10Ac7g17172 Beta vulgaris HOM05D000003 ORTHO05D000007 8.9e-10 68.2 98 32.7
EL10As3g23356 Beta vulgaris HOM05D000003 ORTHO05D000007 8.9e-10 68.2 88 33.0
EL10Ac7g17199 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-09 67.8 118 30.5
Peaxi162Scf00030g02723 Petunia axillaris HOM05D000003 ORTHO05D000006 2.0e-09 67.0 138 24.6
PGSC0003DMG400035899 Solanum tuberosum HOM05D000003 ORTHO05D000007 2.0e-09 67.0 87 34.5
CANSAT11G2544 Cannabis sativa HOM05D000003 ORTHO05D000007 2.6e-09 66.6 195 23.6
EL10Ac6g14808 Beta vulgaris HOM05D000003 ORTHO05D000007 4.4e-09 65.9 103 29.1
EL10Ac8g19738 Beta vulgaris HOM05D000003 ORTHO05D000007 4.4e-09 65.9 88 35.2
CANSAT25G1407 Cannabis sativa HOM05D000003 ORTHO05D000007 5.8e-09 65.5 221 22.6
CANSAT35G0925 Cannabis sativa HOM05D000003 ORTHO05D000007 5.8e-09 65.5 260 24.2
Dinv44147 Davidia involucrata HOM05D000003 ORTHO05D000007 5.8e-09 65.5 91 35.2
Ah.03g143470 Amaranthus hybridus HOM05D000003 ORTHO05D000007 7.6e-09 65.1 176 27.3
EL10As22g24223 Beta vulgaris HOM05D000003 ORTHO05D000007 1.3e-08 64.3 221 23.1
EL10Ac6g14497 Beta vulgaris HOM05D000003 ORTHO05D000007 2.9e-08 63.2 212 26.4
EL10Ac8g19497 Beta vulgaris HOM05D000003 ORTHO05D000007 3.8e-08 62.8 84 31.0
CAN.G265.4 Capsicum annuum HOM05D015165 ORTHO05D011611 3.8e-08 62.8 94 29.8
Nitab4.5_0004011g0050 Nicotiana tabacum HOM05D000003 ORTHO05D011611 3.8e-08 62.8 59 39.0
EL10Ac2g02962 Beta vulgaris HOM05D000003 ORTHO05D000007 4.9e-08 62.4 100 34.0
Nitab4.5_0000829g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.9e-08 62.4 117 28.2
Sopen03g020920 Solanum pennellii HOM05D015165 ORTHO05D017089 4.9e-08 62.4 56 42.9
CANSAT78G1313 Cannabis sativa HOM05D000003 ORTHO05D000007 6.4e-08 62.0 224 24.6
Ah.13g067160 Amaranthus hybridus HOM05D017406 ORTHO05D000007 1.1e-07 61.2 87 35.6
Dinv34972 Davidia involucrata HOM05D000003 ORTHO05D000007 1.1e-07 61.2 237 21.5
Solyc10g075080.1 Solanum lycopersicum HOM05D015165 ORTHO05D011611 1.9e-07 60.5 73 35.6
CANSAT25G3709 Cannabis sativa HOM05D000003 ORTHO05D000007 2.4e-07 60.1 113 35.4
PGSC0003DMG400032773 Solanum tuberosum HOM05D000003 ORTHO05D000007 2.4e-07 60.1 95 27.4
Ah.10g026810 Amaranthus hybridus HOM05D000003 ORTHO05D000007 3.2e-07 59.7 113 33.6
Nitab4.5_0003434g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.2e-07 59.7 95 30.5
Ah.10g026680 Amaranthus hybridus HOM05D000003 ORTHO05D000004 5.4e-07 58.9 164 25.0
Dinv13780 Davidia involucrata HOM05D000003 ORTHO05D000007 5.4e-07 58.9 264 22.7
PGSC0003DMG400041473 Solanum tuberosum HOM05D000003 ORTHO05D000007 5.4e-07 58.9 249 21.7
Hund00727 Selenicereus undatus HOM05D063244 ORTHO05D011611 7.1e-07 58.5 128 25.0
Sopen05g026260 Solanum pennellii HOM05D000003 ORTHO05D000007 7.1e-07 58.5 95 27.4
CANSAT11G2162 Cannabis sativa HOM05D000003 ORTHO05D000007 9.3e-07 58.2 179 24.0
Dinv39840 Davidia involucrata HOM05D000003 ORTHO05D000007 9.3e-07 58.2 91 29.7
Peaxi162Scf00087g00091 Petunia axillaris HOM05D000003 ORTHO05D000007 9.3e-07 58.2 94 29.8
Psat3g081760 Pisum sativum HOM05D000003 ORTHO05D000007 9.3e-07 58.2 251 22.3
EL10Ac6g14708 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-06 57.8 249 24.1
CANSAT11G0663 Cannabis sativa HOM05D000004 ORTHO05D000034 1.2e-06 57.8 70 35.7
Dinv36847 Davidia involucrata HOM05D000003 ORTHO05D000007 1.2e-06 57.8 262 20.6
PGSC0003DMG402017944 Solanum tuberosum HOM05D000003 ORTHO05D000007 1.2e-06 57.8 205 20.0
EL10Ac1g01488 Beta vulgaris HOM05D000003 ORTHO05D000007 2.7e-06 56.6 173 23.7
EL10Ac1g02231 Beta vulgaris HOM05D000003 ORTHO05D000007 2.7e-06 56.6 68 39.7
CANSAT21G1997 Cannabis sativa HOM05D000003 ORTHO05D000006 3.5e-06 56.2 121 31.4
Dinv00948 Davidia involucrata HOM05D000003 ORTHO05D000007 3.5e-06 56.2 93 30.1
Solyc03g078190.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 4.6e-06 55.8 56 41.1
Dinv18316 Davidia involucrata HOM05D000003 ORTHO05D000007 6.0e-06 55.5 220 23.2
Peaxi162Scf00704g00021 Petunia axillaris HOM05D000003 ORTHO05D000007 6.0e-06 55.5 218 22.9
Peaxi162Scf01533g00028 Petunia axillaris HOM05D000003 ORTHO05D000007 6.0e-06 55.5 198 20.2
Sopen00g005560 Solanum pennellii HOM05D000003 ORTHO05D000006 6.0e-06 55.5 201 22.4
EL10Ac1g01519 Beta vulgaris HOM05D000003 ORTHO05D000007 7.8e-06 55.1 83 30.1


User provided reference genes

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