Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 9.2e-81 303.5 155 100.0
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 2.1e-56 222.6 151 72.8
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 7.8e-56 220.7 151 71.5
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 1.0e-55 220.3 155 68.4
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 2.3e-55 219.2 155 70.3
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 5.6e-54 214.5 150 71.3
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.2e-53 213.4 150 70.0
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.6e-53 213.0 157 68.2
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.6e-53 213.0 149 70.5
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 2.1e-53 212.6 159 68.6
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.8e-53 212.2 149 69.1
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 2.8e-53 212.2 153 70.6
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 4.7e-53 211.5 165 66.7
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 4.0e-52 208.4 154 68.2
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 5.2e-52 208.0 147 70.1
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 8.9e-52 207.2 152 67.8
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.2e-51 206.8 152 65.8
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 5.8e-51 204.5 152 65.8
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 1.7e-50 203.0 153 66.7
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 3.8e-50 201.8 149 67.1
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 4.9e-50 201.4 154 65.6
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 6.4e-50 201.1 151 64.9
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 3.2e-49 198.7 155 64.5
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 9.2e-49 197.2 159 62.3
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.2e-48 196.8 150 63.3
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 1.6e-48 196.4 156 64.1
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.6e-48 196.4 130 73.8
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 2.1e-48 196.1 150 65.3
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.0e-47 193.7 152 63.2
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.3e-47 193.4 146 65.1
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 2.3e-47 192.6 152 61.8
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 3.0e-47 192.2 151 63.6
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 3.0e-47 192.2 155 60.0
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 6.6e-47 191.0 150 62.0
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 8.7e-47 190.7 153 62.7
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 8.7e-47 190.7 150 61.3
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.1e-46 190.3 151 62.3
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.5e-46 189.9 151 63.6
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 1.9e-46 189.5 152 60.5
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 2.5e-46 189.1 155 63.2
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 2.5e-46 189.1 151 61.6
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 2.5e-46 189.1 151 60.3
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 4.3e-46 188.3 149 65.8
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 5.6e-46 188.0 172 56.4
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 7.3e-46 187.6 155 61.9
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 7.3e-46 187.6 153 60.1
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 7.3e-46 187.6 152 61.2
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 7.3e-46 187.6 151 59.6
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.3e-45 186.8 124 72.6
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.3e-45 186.8 150 60.7
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.6e-45 186.4 151 59.6
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 2.1e-45 186.0 155 62.6
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 2.8e-45 185.7 150 58.7
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 3.6e-45 185.3 153 60.8
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 3.6e-45 185.3 153 60.8
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 3.6e-45 185.3 153 60.8
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 3.6e-45 185.3 168 58.9
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 3.6e-45 185.3 158 56.3
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 3.6e-45 185.3 177 56.5
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 6.2e-45 184.5 150 60.7
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.1e-44 183.7 160 55.6
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.1e-44 183.7 152 59.2
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 1.4e-44 183.3 148 62.2
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 1.4e-44 183.3 155 61.3
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 1.8e-44 183.0 147 61.2
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 5.3e-44 181.4 149 59.7
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 6.9e-44 181.0 155 60.6
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 9.0e-44 180.6 155 58.7
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 1.5e-43 179.9 153 56.9
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 2.6e-43 179.1 155 60.0
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 2.6e-43 179.1 135 65.9
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 4.4e-43 178.3 190 51.6
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 5.8e-43 177.9 150 58.7
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 7.6e-43 177.6 147 57.8
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.7e-42 176.4 125 68.8
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.4e-41 173.3 147 60.5
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.4e-41 173.3 147 60.5
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.9e-41 172.9 144 60.4
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 3.2e-41 172.2 150 58.0
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.6e-40 169.9 115 72.2
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 2.7e-40 169.1 133 65.4
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 7.8e-40 167.5 112 72.3
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.1e-38 163.7 138 59.4
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.1e-38 163.7 118 66.1
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.6e-37 159.8 151 53.6
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 2.8e-37 159.1 126 61.1
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 8.1e-37 157.5 148 53.4
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 1.8e-36 156.4 123 61.0
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 3.1e-36 155.6 126 63.5
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 9.0e-36 154.1 113 63.7
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 2.0e-35 152.9 113 65.5
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 1.4e-33 146.7 111 62.2
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.8e-31 139.8 112 62.5
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 1.1e-30 137.1 159 49.1
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.5e-30 136.7 157 49.7
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 5.6e-30 134.8 111 60.4
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 4.8e-29 131.7 97 63.9
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 8.1e-29 131.0 85 72.9
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 2.5e-25 119.4 148 40.5
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 6.7e-23 111.3 148 36.5
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.5e-22 110.2 80 67.5
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 5.7e-22 108.2 71 73.2
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 8.2e-21 104.4 122 41.0
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 8.2e-21 104.4 88 61.4
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 8.2e-21 104.4 73 65.8
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.1e-20 104.0 71 69.0
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 1.5e-19 100.1 127 38.6
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 4.5e-19 98.6 144 37.5
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 2.9e-18 95.9 149 36.2
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 8.4e-18 94.4 74 59.5
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 8.4e-18 94.4 70 62.9
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 2.3e-15 86.3 82 53.7
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.1e-12 77.4 98 43.9
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.1e-09 67.4 62 56.5
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 6.7e-07 58.2 57 52.6
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 2.0e-06 56.6 134 26.9


User provided reference genes

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