Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 4.6e-49 197.6 101 100.0
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 1.5e-31 139.4 103 77.7
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 6.3e-30 134.0 104 76.9
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 6.3e-30 134.0 103 71.8
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 3.1e-29 131.7 101 70.3
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 3.1e-29 131.7 101 72.3
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 3.1e-29 131.7 102 70.6
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 6.9e-29 130.6 102 72.5
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 1.2e-28 129.8 101 70.3
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 1.5e-28 129.4 101 70.3
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 2.0e-28 129.0 101 68.3
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 3.4e-28 128.3 101 68.3
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 4.5e-28 127.9 101 66.3
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 4.5e-28 127.9 103 70.9
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 7.7e-28 127.1 101 69.3
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 1.0e-27 126.7 103 71.8
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 1.0e-27 126.7 101 67.3
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 1.3e-27 126.3 102 73.5
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.7e-27 125.9 101 68.3
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 1.7e-27 125.9 101 70.3
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 1.7e-27 125.9 101 70.3
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 1.7e-27 125.9 103 71.8
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 2.9e-27 125.2 102 67.6
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 5.0e-27 124.4 102 72.5
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 6.5e-27 124.0 101 69.3
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 6.5e-27 124.0 101 67.3
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 6.5e-27 124.0 101 69.3
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 8.5e-27 123.6 102 67.6
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 8.5e-27 123.6 103 69.9
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 1.1e-26 123.2 103 69.9
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.4e-26 122.9 102 69.6
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 1.4e-26 122.9 103 68.0
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 2.5e-26 122.1 99 68.7
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 2.5e-26 122.1 101 65.3
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 4.2e-26 121.3 99 67.7
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 5.5e-26 120.9 102 63.7
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 5.5e-26 120.9 99 69.7
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 7.2e-26 120.6 102 72.5
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 7.2e-26 120.6 102 67.6
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 9.4e-26 120.2 99 66.7
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 9.4e-26 120.2 102 65.7
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.2e-25 119.8 102 70.6
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 1.2e-25 119.8 102 72.5
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.6e-25 119.4 102 67.6
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 1.6e-25 119.4 102 67.6
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 1.6e-25 119.4 102 67.6
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 6.1e-25 117.5 101 66.3
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.0e-24 116.7 92 70.7
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 3.9e-24 114.8 100 63.0
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 1.5e-23 112.8 94 64.9
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 5.7e-23 110.9 92 68.5
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 9.7e-23 110.2 97 66.0
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 3.7e-22 108.2 101 61.4
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 8.2e-22 107.1 102 63.7
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 8.2e-22 107.1 102 60.8
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 1.1e-21 106.7 104 65.4
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.1e-21 106.7 101 62.4
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 1.4e-21 106.3 106 61.3
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 1.8e-21 105.9 99 61.6
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 1.8e-21 105.9 106 61.3
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.8e-21 105.9 103 59.2
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 1.8e-21 105.9 103 59.2
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 2.4e-21 105.5 100 68.0
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 2.4e-21 105.5 101 67.3
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 3.1e-21 105.1 99 61.6
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 4.1e-21 104.8 105 62.9
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 5.3e-21 104.4 106 60.4
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 5.3e-21 104.4 106 60.4
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 5.3e-21 104.4 103 58.3
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 6.9e-21 104.0 101 57.4
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 6.9e-21 104.0 97 66.0
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 6.9e-21 104.0 105 62.9
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 9.1e-21 103.6 104 62.5
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 9.1e-21 103.6 105 61.0
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 1.5e-20 102.8 104 62.5
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 2.0e-20 102.4 96 63.5
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 2.0e-20 102.4 106 59.4
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 4.5e-20 101.3 102 61.8
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 1.3e-19 99.8 95 60.0
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 2.9e-19 98.6 102 60.8
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 3.8e-19 98.2 101 62.4
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.1e-18 96.7 95 58.9
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.2e-17 93.2 102 55.9
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 3.6e-17 91.7 100 55.0
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 4.7e-17 91.3 105 58.1
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 1.4e-16 89.7 103 54.4
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 1.4e-16 89.7 103 54.4
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 2.3e-16 89.0 99 55.6
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 8.8e-16 87.0 105 56.2
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 2.6e-15 85.5 99 51.5
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 7.4e-15 84.0 105 53.3
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 5.3e-13 77.8 84 58.3
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 1.2e-12 76.6 90 58.9
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.7e-11 72.8 79 58.2
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 6.5e-11 70.9 88 53.4
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 1.5e-10 69.7 71 60.6
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 1.6e-09 66.2 76 57.9
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 8.0e-09 63.9 94 44.7
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 8.8e-08 60.5 106 45.3


User provided reference genes

Program Settings