Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 1.6e-70 269.2 133 100.0
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 2.0e-68 262.3 133 97.7
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 8.5e-59 230.3 133 82.0
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 9.4e-58 226.9 133 81.2
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 1.2e-57 226.5 133 80.5
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.6e-57 226.1 133 81.2
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.6e-57 226.1 133 82.7
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 6.1e-57 224.2 133 80.5
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.8e-56 222.6 133 81.2
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 2.3e-56 222.2 133 81.2
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 3.0e-56 221.9 127 81.1
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 78.2
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 81.2
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 5.1e-56 221.1 133 78.9
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 6.7e-56 220.7 133 79.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 8.8e-56 220.3 133 78.2
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 80.5
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 1.5e-55 219.5 133 78.9
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.5e-55 218.8 133 78.2
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 2.5e-55 218.8 133 78.2
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 2.5e-55 218.8 133 78.2
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 3.3e-55 218.4 133 77.4
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 3.3e-55 218.4 133 78.2
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 5.7e-55 217.6 133 78.9
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 7.4e-55 217.2 133 78.2
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 9.7e-55 216.9 130 79.2
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 9.7e-55 216.9 132 78.8
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 1.3e-54 216.5 133 78.2
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 2.2e-54 215.7 131 78.6
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 2.8e-54 215.3 130 80.0
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 3.7e-54 214.9 132 80.3
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 4.8e-54 214.5 133 76.7
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 6.3e-54 214.2 133 73.7
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 3.1e-53 211.8 133 75.9
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.1e-53 211.8 133 78.2
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 4.1e-53 211.5 133 76.7
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 4.1e-53 211.5 133 78.2
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.2e-52 209.9 133 75.2
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 1.5e-52 209.5 139 75.5
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 3.4e-52 208.4 130 74.6
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 3.4e-52 208.4 133 75.9
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 3.4e-52 208.4 133 75.9
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 5.9e-52 207.6 140 73.6
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 5.9e-52 207.6 133 75.2
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 5.0e-51 204.5 134 75.4
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 5.5e-50 201.1 133 73.7
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 7.2e-50 200.7 113 84.1
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 9.4e-50 200.3 128 73.4
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 1.0e-48 196.8 133 71.4
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 2.3e-48 195.7 133 72.2
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 2.3e-48 195.7 118 77.1
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 3.9e-48 194.9 133 69.2
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 5.1e-48 194.5 133 68.4
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 5.1e-48 194.5 181 57.5
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 6.7e-48 194.1 133 68.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 6.7e-48 194.1 113 81.4
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 6.7e-48 194.1 133 67.7
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 1.1e-47 193.4 133 66.9
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.5e-47 193.0 133 67.7
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 2.0e-47 192.6 113 79.6
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 67.7
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.6e-47 192.2 133 68.4
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 9.7e-47 190.3 133 67.7
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 9.7e-47 190.3 133 65.4
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 1.7e-46 189.5 133 66.2
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 8.2e-46 187.2 133 67.7
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 1.1e-45 186.8 176 55.7
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.4e-45 185.7 133 67.7
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 2.0e-44 182.6 128 74.2
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 5.0e-43 177.9 113 75.2
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 2.5e-42 175.6 102 78.4
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 2.7e-41 172.2 139 60.4
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 6.1e-41 171.0 128 64.1
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.4e-40 169.9 105 75.2
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.8e-40 169.5 98 79.6
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 3.9e-40 168.3 128 63.3
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 5.2e-40 167.9 127 60.6
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.5e-39 166.4 105 75.2
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.3e-38 163.3 105 74.3
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 1.7e-38 162.9 103 71.8
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 2.8e-38 162.2 105 68.6
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 8.2e-38 160.6 92 81.5
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 1.4e-37 159.8 98 77.6
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 4.1e-37 158.3 119 60.5
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 1.6e-36 156.4 96 75.0
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 2.0e-31 139.4 116 60.3
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 4.8e-30 134.8 133 58.6
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 8.3e-30 134.0 111 54.1
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 3.5e-28 128.6 133 55.6
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 3.8e-27 125.2 113 55.8
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 1.0e-24 117.1 70 77.1
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 3.4e-23 112.1 102 53.9
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 2.2e-22 109.4 129 41.1
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 1.5e-18 96.7 110 43.6
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 2.5e-18 95.9 61 77.0
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 2.1e-17 92.8 67 67.2
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 4.7e-17 91.7 109 43.1
CBR_g37936 Chara braunii HOM05D019869 ORTHO05D028728 1.6e-12 76.6 94 35.1
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 2.7e-12 75.9 70 55.7
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 1.7e-11 73.2 47 63.8
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 9.5e-10 67.4 89 39.3
COL.COLO4_30985 Corchorus olitorius HOM05D001363 ORTHO05D006255 8.0e-09 64.3 51 66.7
unitig_747.g21224 Utricularia gibba HOM05D007407 ORTHO05D009298 4.4e-07 58.5 36 69.4
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 4.9e-06 55.1 34 61.8


User provided reference genes

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