Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 2.7e-94 348.6 170 100.0
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.2e-78 296.6 165 87.3
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.6e-78 296.2 165 87.3
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 8.0e-78 293.9 170 83.5
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 1.8e-77 292.7 169 84.6
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 2.3e-77 292.4 165 86.1
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 2.3e-77 292.4 165 85.5
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 4.0e-77 291.6 165 85.5
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 6.7e-77 290.8 166 85.5
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 4.4e-76 288.1 165 83.0
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 4.4e-76 288.1 169 81.1
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 5.7e-76 287.7 165 84.2
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 7.5e-76 287.3 165 84.2
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 2.8e-75 285.4 165 83.6
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.8e-75 285.4 166 83.7
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.8e-75 285.4 166 83.1
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 3.7e-75 285.0 165 83.0
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 4.8e-75 284.6 165 83.6
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.1e-74 283.5 166 84.3
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.1e-74 283.5 166 84.3
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 1.8e-74 282.7 166 83.7
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 1.8e-74 282.7 165 84.2
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.4e-74 282.3 165 82.4
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 3.1e-74 282.0 165 81.8
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 4.1e-74 281.6 166 83.7
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 4.1e-74 281.6 165 83.0
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 4.1e-74 281.6 160 85.0
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 7.0e-74 280.8 162 84.6
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 1.2e-73 280.0 165 81.2
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.2e-73 280.0 163 83.4
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.6e-73 279.6 165 81.2
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 2.0e-73 279.3 171 80.7
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 2.7e-73 278.9 163 82.2
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.5e-73 278.5 152 86.8
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 4.5e-73 278.1 165 81.8
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 4.5e-73 278.1 165 81.8
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 4.5e-73 278.1 165 81.2
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 5.9e-73 277.7 162 82.7
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 7.7e-73 277.3 165 81.8
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 1.7e-72 276.2 163 81.6
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.7e-72 276.2 161 82.6
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 1.7e-72 276.2 160 83.1
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 2.9e-72 275.4 166 81.9
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 6.5e-72 274.2 161 82.6
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 8.5e-72 273.9 166 81.9
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 8.5e-72 273.9 165 80.6
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 1.5e-71 273.1 165 77.6
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.9e-71 272.7 165 79.4
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.5e-71 272.3 156 82.7
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.5e-71 272.3 165 79.4
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 7.2e-71 270.8 156 83.3
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 2.1e-70 269.2 168 78.0
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 2.1e-70 269.2 165 80.0
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 2.7e-70 268.9 165 81.2
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 2.7e-70 268.9 172 79.1
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 4.7e-70 268.1 168 78.0
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.0e-69 266.9 156 83.3
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 1.0e-69 266.9 165 75.8
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.8e-69 266.2 151 84.1
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.8e-69 266.2 168 76.2
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 1.8e-69 266.2 164 81.7
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 2.3e-69 265.8 167 78.4
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 3.0e-69 265.4 165 80.0
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 4.0e-69 265.0 170 77.1
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 4.0e-69 265.0 166 77.1
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 5.2e-69 264.6 170 77.6
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 6.8e-69 264.2 164 78.0
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 8.8e-69 263.8 169 76.3
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.2e-68 263.5 169 77.5
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.2e-68 263.5 170 75.9
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.2e-68 263.5 170 75.9
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 2.0e-68 262.7 157 80.9
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.6e-68 262.3 161 80.1
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.6e-68 262.3 165 77.0
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 4.4e-68 261.5 161 78.3
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 5.7e-68 261.2 170 75.9
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 7.5e-68 260.8 157 80.3
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 7.5e-68 260.8 154 82.5
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 7.5e-68 260.8 167 75.4
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 7.5e-68 260.8 167 76.6
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.3e-67 260.0 157 80.3
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.3e-67 260.0 167 77.2
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 1.7e-67 259.6 167 77.2
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 1.7e-67 259.6 167 76.0
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 4.8e-67 258.1 157 79.6
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 4.8e-67 258.1 168 76.8
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 6.3e-67 257.7 157 79.0
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 6.3e-67 257.7 156 79.5
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 6.3e-67 257.7 166 74.1
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.4e-66 256.5 156 78.8
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.4e-66 256.5 165 77.0
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 2.4e-66 255.8 161 77.6
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 5.4e-66 254.6 164 75.6
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 7.0e-66 254.2 165 75.2
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.2e-65 253.4 156 78.2
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.0e-65 252.7 165 73.3
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 2.7e-65 252.3 169 74.6
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.0e-64 250.4 139 83.5
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.0e-64 250.4 139 83.5
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.9e-64 248.8 154 76.0
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.5e-63 246.5 191 67.5
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 1.9e-63 246.1 163 73.0
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 4.2e-63 245.0 169 74.0
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 4.2e-63 245.0 165 75.2
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 6.8e-61 237.7 163 72.4
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 7.5e-60 234.2 183 63.9
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 4.1e-58 228.4 154 70.1
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 2.0e-57 226.1 166 72.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.3e-56 223.4 142 78.2
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 3.3e-55 218.8 141 73.8
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 5.6e-55 218.0 181 63.5
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 3.6e-54 215.3 158 67.7
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 3.6e-54 215.3 134 78.4
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 4.0e-53 211.8 148 69.6
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.2e-52 210.3 150 66.0
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 8.3e-51 204.1 121 80.2
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.4e-50 203.4 310 40.6
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 9.5e-47 190.7 114 80.7
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 9.2e-42 174.1 162 60.5
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 8.9e-37 157.5 303 37.0
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 1.2e-33 147.1 204 44.1
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.2e-33 147.1 213 44.6
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.1e-26 124.0 84 75.0
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 7.8e-25 117.9 76 72.4
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 8.6e-24 114.4 66 80.3
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.5e-23 113.6 76 72.4
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 4.4e-20 102.1 56 78.6
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 6.2e-14 81.6 45 75.6
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 9.9e-12 74.3 65 52.3
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 1.1e-10 70.9 88 43.2
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 5.4e-10 68.6 44 75.0
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.5e-09 65.9 119 35.3
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.3e-07 59.3 39 69.2


User provided reference genes

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