Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 0.0e+00 1258.8 609 100.0
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 1.1e-297 1026.2 597 81.6
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 4.0e-297 1024.2 576 83.3
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 4.4e-296 1020.8 588 81.1
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 9.2e-294 1013.1 575 82.6
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 9.2e-294 1013.1 575 82.6
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 2.1e-293 1011.9 588 80.4
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 7.8e-293 1010.0 590 81.5
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 7.8e-293 1010.0 588 80.1
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 1.0e-292 1009.6 588 80.4
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 2.3e-292 1008.4 575 82.1
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 5.1e-292 1007.3 597 79.9
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 1.1e-291 1006.1 635 76.5
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 1.5e-291 1005.7 588 80.6
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 1.5e-291 1005.7 574 82.1
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 2.5e-291 1005.0 586 80.4
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 4.3e-291 1004.2 599 79.3
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 7.3e-291 1003.4 602 78.2
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 1.2e-290 1002.7 606 78.1
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 2.8e-290 1001.5 602 78.2
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 1.4e-289 999.2 588 79.3
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 1.8e-289 998.8 576 80.7
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 4.0e-289 997.7 576 80.9
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 8.9e-289 996.5 605 76.9
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 4.9e-287 990.7 598 77.8
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 8.3e-287 989.9 598 77.6
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 2.4e-286 988.4 575 80.5
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 5.4e-286 987.3 586 79.4
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 7.1e-286 986.9 591 78.0
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 2.7e-285 984.9 598 76.9
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 2.7e-285 984.9 576 79.7
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 3.5e-285 984.6 574 79.8
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 3.5e-285 984.6 576 80.2
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 1.0e-284 983.0 576 80.6
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 1.7e-284 982.2 587 78.9
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 1.9e-283 978.8 596 76.7
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 8.1e-282 973.4 575 79.7
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 1.8e-281 972.2 590 75.9
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 6.8e-281 970.3 588 76.0
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 6.8e-281 970.3 636 74.4
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 1.5e-280 969.1 578 78.4
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 2.0e-280 968.8 574 78.2
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 4.4e-280 967.6 596 76.8
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 9.9e-280 966.5 570 81.2
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 1.3e-279 966.1 599 75.3
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 2.9e-279 964.9 623 74.0
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 4.9e-279 964.1 587 75.8
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 5.4e-278 960.7 575 77.6
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.6e-277 959.1 588 75.7
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 2.1e-277 958.7 603 75.3
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 4.6e-277 957.6 594 75.9
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 3.9e-276 954.5 599 73.8
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 6.6e-276 953.7 573 79.1
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 1.5e-275 952.6 599 74.0
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 4.3e-275 951.0 599 73.8
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 2.8e-274 948.3 606 73.1
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 4.8e-274 947.6 577 76.9
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 8.1e-274 946.8 576 78.3
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 1.4e-273 946.0 587 74.8
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 1.5e-272 942.6 584 75.0
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 1.7e-271 939.1 575 76.2
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 6.4e-271 937.2 598 73.6
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 1.1e-270 936.4 550 78.9
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 2.4e-270 935.3 598 73.9
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 3.2e-270 934.9 607 72.0
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 1.2e-269 932.9 585 74.4
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 2.1e-269 932.2 598 73.4
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 1.0e-268 929.9 560 77.1
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 1.9e-267 925.6 597 72.5
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 3.3e-267 924.9 598 72.7
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 7.3e-267 923.7 592 74.5
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 1.3e-266 922.9 574 74.2
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 3.6e-266 921.4 597 71.7
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 8.1e-266 920.2 597 71.7
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 2.4e-265 918.7 574 73.7
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 2.4e-265 918.7 575 74.3
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 4.0e-265 917.9 574 73.3
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 9.9e-264 913.3 534 80.5
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 2.2e-263 912.1 589 71.5
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 4.9e-263 911.0 589 71.3
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 3.5e-261 904.8 739 61.6
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 1.8e-260 902.5 574 72.8
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 1.8e-260 902.5 574 72.8
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 1.8e-260 902.5 574 72.8
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 3.0e-260 901.7 599 70.8
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 8.7e-260 900.2 558 74.2
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 6.5e-255 884.0 575 72.5
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 3.2e-254 881.7 577 69.8
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 1.8e-252 875.9 576 69.6
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 1.0e-244 850.1 576 68.6
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 1.0e-244 850.1 575 71.7
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 5.3e-241 837.8 567 73.0
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 1.8e-228 796.2 598 62.0
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 1.9e-222 776.2 494 73.7
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.3e-218 763.5 575 62.3
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 1.6e-216 756.5 580 60.9
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 5.0e-191 671.8 363 82.1
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 3.8e-170 602.4 470 64.3
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 8.1e-141 505.0 428 58.9
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 6.9e-140 501.9 533 50.3
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 2.3e-135 486.9 299 78.9
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 2.5e-134 483.4 358 66.5
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 1.7e-130 470.7 324 69.8
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 9.4e-121 438.3 241 79.7
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 2.1e-80 304.3 700 31.7
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 6.4e-77 292.7 152 84.2
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 1.9e-65 254.6 247 55.5
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 2.1e-51 208.0 200 53.0
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 5.5e-28 130.2 72 84.7
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 9.3e-28 129.4 73 82.2
Atru.chr11.1906 Acer truncatum HOM05D006576 ORTHO05D008644 3.5e-27 127.5 65 87.7
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.8e-21 107.5 71 63.4
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.4e-20 105.5 70 64.3
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 2.3e-18 98.2 64 67.2
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 3.0e-18 97.8 70 60.0
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 9.0e-15 86.3 82 52.4
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 5.5e-12 77.0 49 75.5
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 5.5e-12 77.0 49 75.5
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 5.5e-12 77.0 49 75.5
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 7.2e-12 76.6 98 46.9
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 7.9e-11 73.2 52 61.5
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 1.7e-08 65.5 91 46.2
Zm00001eb413530 Zea mays HOM05D014217 ORTHO05D000496 2.4e-07 61.6 98 38.8


User provided reference genes

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