Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 5.0e-46 188.0 138 100.0
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 5.0e-46 188.0 138 100.0
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 2.1e-28 129.4 131 71.8
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 6.1e-28 127.9 129 74.4
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 6.1e-28 127.9 131 73.3
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 6.1e-28 127.9 131 68.7
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 8.0e-28 127.5 131 77.1
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 8.0e-28 127.5 134 73.1
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 1.8e-27 126.3 132 63.6
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 4.0e-27 125.2 143 68.5
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 5.2e-27 124.8 131 71.0
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 6.8e-27 124.4 132 71.2
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 6.8e-27 124.4 139 75.5
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 6.8e-27 124.4 137 59.1
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 8.9e-27 124.0 136 61.8
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 4.4e-26 121.7 141 69.5
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 5.7e-26 121.3 141 69.5
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 9.8e-26 120.6 140 62.9
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 1.3e-25 120.2 144 65.3
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 1.7e-25 119.8 130 74.6
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 2.2e-25 119.4 138 69.6
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 2.2e-25 119.4 132 72.7
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 2.9e-25 119.0 129 71.3
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.9e-25 119.0 136 59.6
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 6.3e-25 117.9 128 73.4
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 8.3e-25 117.5 131 74.8
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 8.3e-25 117.5 131 74.8
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 1.8e-24 116.3 138 63.8
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 1.8e-24 116.3 134 70.9
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 2.4e-24 115.9 130 71.5
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 3.2e-24 115.5 135 59.3
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 4.1e-24 115.2 135 69.6
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 4.1e-24 115.2 129 69.8
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 1.2e-23 113.6 134 70.1
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 2.0e-23 112.8 134 62.7
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 4.6e-23 111.7 130 73.1
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 4.6e-23 111.7 128 72.7
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 7.8e-23 110.9 131 73.3
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 1.0e-22 110.5 138 57.2
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 1.3e-22 110.2 138 67.4
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 3.9e-22 108.6 134 57.5
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 8.6e-22 107.5 137 56.9
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.1e-21 107.1 137 67.2
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 1.1e-21 107.1 131 71.0
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 2.5e-21 105.9 137 56.9
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 4.3e-21 105.1 136 64.7
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 7.3e-21 104.4 129 62.8
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 1.6e-20 103.2 130 63.1
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 8.0e-20 100.9 134 64.9
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.4e-19 100.1 123 57.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 1.8e-19 99.8 128 57.8
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 2.3e-19 99.4 137 67.2
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 2.3e-19 99.4 128 64.8
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 3.1e-19 99.0 135 65.9
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 4.0e-19 98.6 144 56.9
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 4.0e-19 98.6 144 56.9
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 4.0e-19 98.6 128 71.1
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 6.8e-19 97.8 137 56.2
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 1.5e-18 96.7 135 60.0
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 2.0e-18 96.3 142 50.0
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 2.0e-18 96.3 137 54.0
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 2.6e-18 95.9 127 65.4
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 3.4e-18 95.5 135 57.0
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 5.8e-18 94.7 132 63.6
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 9.8e-18 94.0 128 60.9
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 2.9e-17 92.4 138 64.5
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 4.9e-17 91.7 130 68.5
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 8.3e-17 90.9 129 63.6
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 8.3e-17 90.9 135 60.7
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 2.4e-16 89.4 127 66.1
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 4.1e-16 88.6 131 64.9
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 5.4e-16 88.2 130 57.7
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 7.0e-16 87.8 130 63.8
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 7.0e-16 87.8 130 63.8
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 7.0e-16 87.8 130 63.8
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 7.0e-16 87.8 130 63.8
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 9.2e-16 87.4 127 61.4
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 9.2e-16 87.4 118 61.9
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 1.0e-14 84.0 132 62.1
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 1.3e-14 83.6 163 42.3
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 6.6e-14 81.3 169 50.9
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 1.1e-13 80.5 100 74.0
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 1.9e-13 79.7 129 62.0
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 1.6e-12 76.6 100 71.0
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 3.6e-12 75.5 136 61.8
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 8.1e-12 74.3 82 65.9
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 1.1e-11 73.9 126 62.7
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 3.1e-11 72.4 113 56.6
PGR102G1605 Punica granatum HOM05D007581 ORTHO05D009250 5.8e-10 68.2 107 70.1
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 7.5e-10 67.8 107 65.4
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.4e-08 63.5 99 68.7
QL09p000872 Quercus lobata HOM05D007581 ORTHO05D009250 3.2e-08 62.4 97 73.2
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 1.2e-07 60.5 98 65.3
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 2.1e-07 59.7 104 48.1
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 7.8e-07 57.8 122 44.3
AUR62038551 Chenopodium quinoa HOM05D007581 ORTHO05D009250 1.3e-06 57.0 138 29.0
Dinv25473 Davidia involucrata HOM05D007581 ORTHO05D009250 2.3e-06 56.2 58 48.3
Cfa008025 Carpinus fangiana HOM05D007581 ORTHO05D009250 6.6e-06 54.7 144 30.6
Mapoly0034s0024 Marchantia polymorpha HOM05D020710 ORTHO05D009250 6.6e-06 54.7 129 56.6


User provided reference genes

Program Settings