Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 1.3e-293 1012.3 498 100.0
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 1.9e-204 716.1 510 71.0
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 5.9e-198 694.5 497 69.6
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 4.2e-196 688.3 509 69.7
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 2.0e-193 679.5 502 67.7
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 7.5e-193 677.6 500 68.6
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 2.7e-190 669.1 496 66.5
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.9e-188 662.9 501 66.5
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 9.5e-188 660.6 493 67.3
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.6e-187 659.8 501 66.1
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 3.6e-187 658.7 501 66.1
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.0e-186 657.1 469 69.3
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 3.1e-186 655.6 488 66.6
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 4.0e-186 655.2 471 68.8
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.0e-185 652.9 501 65.9
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.0e-185 652.9 501 65.7
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 5.8e-185 651.4 490 67.1
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 9.8e-185 650.6 438 73.7
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 2.9e-184 649.0 494 66.0
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.9e-184 648.3 500 65.4
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.2e-183 645.6 501 65.5
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 3.2e-183 645.6 518 62.0
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.2e-182 643.7 516 64.3
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 2.7e-182 642.5 496 66.7
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.7e-181 639.8 438 72.4
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 6.6e-181 637.9 490 66.5
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.1e-180 637.1 437 70.9
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.9e-180 636.3 515 63.7
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.3e-180 635.2 550 60.4
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 9.5e-180 634.0 490 65.5
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 1.2e-179 633.6 470 67.2
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 1.6e-179 633.3 494 64.8
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 2.8e-179 632.5 492 66.7
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 8.1e-179 630.9 525 62.5
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 1.1e-178 630.6 503 63.8
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.1e-178 630.6 514 63.8
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 2.3e-178 629.4 496 63.7
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 2.6e-177 625.9 456 66.7
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 3.4e-177 625.5 515 63.7
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 7.5e-177 624.4 507 63.9
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 2.2e-176 622.9 496 63.7
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 1.4e-175 620.2 496 65.1
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.2e-174 617.1 471 66.0
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 5.1e-173 611.7 511 61.4
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 5.1e-173 611.7 496 62.3
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 2.5e-172 609.4 476 65.3
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 9.5e-172 607.4 495 63.4
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 5.2e-170 601.7 475 64.6
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 8.9e-170 600.9 507 60.7
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 2.6e-169 599.4 494 62.8
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 1.7e-168 596.7 499 61.9
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 2.2e-168 596.3 487 63.4
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 3.7e-168 595.5 398 72.1
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 4.9e-168 595.1 494 61.3
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 8.4e-168 594.3 495 60.4
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 8.4e-168 594.3 510 62.0
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 3.2e-167 592.4 435 67.1
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 5.4e-167 591.7 489 63.0
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 7.1e-167 591.3 477 63.1
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 7.1e-167 591.3 490 62.4
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 9.2e-167 590.9 505 61.2
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 3.5e-166 589.0 507 60.7
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 3.5e-166 589.0 495 60.2
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 1.0e-165 587.4 491 61.3
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 1.3e-165 587.0 497 60.6
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 1.3e-165 587.0 432 67.8
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 1.3e-165 587.0 390 71.3
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 5.1e-165 585.1 496 60.7
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 6.6e-165 584.7 470 62.8
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 2.5e-164 582.8 463 63.1
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 9.6e-164 580.9 453 64.9
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 2.1e-163 579.7 505 60.6
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 2.1e-163 579.7 460 63.3
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 2.8e-163 579.3 496 59.5
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 2.8e-163 579.3 496 59.5
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.2e-163 578.2 373 73.2
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 6.8e-162 574.7 449 65.0
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 8.9e-162 574.3 460 62.0
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 3.8e-160 568.9 523 57.7
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 1.9e-159 566.6 505 59.0
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 3.2e-159 565.8 464 61.6
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 1.3e-157 560.5 518 58.7
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 5.6e-156 555.1 500 58.6
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 2.0e-153 546.6 458 61.8
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 1.9e-151 540.0 691 45.7
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 5.4e-151 538.5 482 59.1
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 9.3e-151 537.7 467 60.6
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 1.7e-149 533.5 493 57.2
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 6.2e-147 525.0 417 64.0
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 1.1e-146 524.2 467 56.5
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 1.2e-145 520.8 445 58.0
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.2e-145 520.8 483 57.8
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 6.4e-144 515.0 480 56.0
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.9e-143 513.5 389 65.0
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.2e-142 510.8 460 57.2
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 4.5e-121 439.1 336 64.3
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 7.9e-118 428.3 256 77.0
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 2.9e-104 383.3 241 75.1
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 5.0e-88 329.3 192 76.6
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 2.7e-81 307.0 183 75.4
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 1.1e-79 301.6 313 56.5
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 3.4e-76 290.0 248 62.5
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.3e-75 288.1 277 58.8
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 4.9e-75 286.2 486 37.2
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 2.3e-72 277.3 249 63.5
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.1e-71 275.0 222 55.4
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 3.1e-69 266.9 163 71.8
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 3.1e-61 240.4 592 29.9
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 4.0e-61 240.0 630 29.4
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 1.4e-58 231.5 242 55.0
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 2.0e-52 211.1 448 32.6
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 1.6e-38 164.9 140 64.3
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 2.6e-36 157.5 361 31.6
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 6.2e-30 136.3 197 42.6
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 3.2e-26 124.0 110 59.1
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 5.6e-23 113.2 66 72.7
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.6e-22 111.7 114 50.9
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.6e-17 95.1 58 70.7
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 1.0e-16 92.4 155 36.1
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 2.3e-16 91.3 167 37.1
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.7e-11 75.1 78 51.3
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 5.0e-11 73.6 84 58.3
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 2.1e-09 68.2 42 66.7
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 1.3e-08 65.5 42 69.0
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 1.8e-08 65.1 130 36.9


User provided reference genes

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