Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 9.0e-65 250.0 116 100.0
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 3.2e-38 161.8 107 70.1
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 1.6e-37 159.5 84 88.1
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 1.6e-37 159.5 104 73.1
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 4.7e-37 157.9 95 75.8
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.0e-36 156.8 112 67.9
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 1.0e-36 156.8 107 68.2
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 8.8e-36 153.7 104 68.3
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 1.5e-35 152.9 111 64.9
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 4.4e-35 151.4 102 70.6
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 7.4e-35 150.6 111 64.0
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 7.4e-35 150.6 84 79.8
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 7.4e-35 150.6 112 62.5
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 9.7e-35 150.2 99 70.7
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.3e-34 149.8 82 81.7
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.3e-34 149.8 80 83.8
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.3e-34 149.8 80 83.8
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.3e-34 149.8 85 77.6
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 1.3e-34 149.8 72 87.5
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 1.7e-34 149.4 82 81.7
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 2.2e-34 149.1 73 86.3
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 2.2e-34 149.1 104 67.3
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 2.2e-34 149.1 73 89.0
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 2.2e-34 149.1 102 71.6
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 3.7e-34 148.3 87 77.0
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 3.7e-34 148.3 72 86.1
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 4.8e-34 147.9 72 87.5
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 4.8e-34 147.9 72 87.5
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 6.3e-34 147.5 111 63.1
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 8.2e-34 147.1 73 86.3
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 1.1e-33 146.7 73 84.9
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 1.1e-33 146.7 73 87.7
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.4e-33 146.4 107 64.5
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 1.4e-33 146.4 72 86.1
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 1.8e-33 146.0 72 86.1
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 4.1e-33 144.8 73 83.6
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 4.1e-33 144.8 86 75.6
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 7.0e-33 144.1 73 82.2
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 9.1e-33 143.7 72 84.7
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 1.5e-32 142.9 88 73.9
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 1.3e-31 139.8 79 78.5
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.9e-31 138.7 95 64.2
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 2.9e-31 138.7 95 64.2
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 6.5e-31 137.5 67 86.6
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 6.5e-31 137.5 67 86.6
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 6.5e-31 137.5 84 72.6
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 1.5e-30 136.3 69 85.5
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 1.5e-30 136.3 81 74.1
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 1.9e-30 136.0 94 68.1
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 5.5e-30 134.4 72 83.3
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 1.6e-29 132.9 103 60.2
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 8.8e-28 127.1 103 59.2
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 8.8e-28 127.1 101 62.4
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 2.2e-26 122.5 116 53.4
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 2.2e-26 122.5 84 66.7
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 8.2e-26 120.6 108 57.4
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 2.4e-25 119.0 104 55.8
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 3.1e-25 118.6 84 67.9
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 7.0e-25 117.5 103 56.3
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 9.1e-25 117.1 72 68.1
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 3.8e-23 111.7 70 71.4
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 1.9e-22 109.4 90 61.1
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 1.9e-22 109.4 52 86.5
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 1.6e-21 106.3 114 51.8
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 3.6e-21 105.1 61 73.8
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 8.0e-21 104.0 98 55.1
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.0e-20 103.6 73 67.1
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 4.0e-20 101.7 78 62.8
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 2.6e-19 99.0 70 67.1
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 3.4e-19 98.6 45 93.3
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 4.4e-19 98.2 88 53.4
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 4.4e-19 98.2 65 66.2
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.7e-18 96.3 115 47.8
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 6.3e-18 94.4 66 66.7
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 8.3e-18 94.0 46 89.1
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.4e-17 93.2 66 63.6
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.8e-17 92.8 91 51.6
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 3.1e-17 92.0 89 52.8
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 5.3e-17 91.3 111 45.0
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 1.0e-15 87.0 63 63.5
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 2.3e-12 75.9 37 83.8
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 3.5e-08 62.0 30 83.3


User provided reference genes

Program Settings