Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 3.7e-240 834.7 506 100.0
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 1.7e-163 580.1 508 64.0
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 1.1e-162 577.4 511 64.4
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.4e-162 577.0 517 63.4
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 5.9e-161 571.6 509 63.5
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 3.8e-160 568.9 508 63.0
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 5.0e-160 568.5 507 62.5
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 1.1e-159 567.4 507 62.1
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.5e-159 567.0 508 62.6
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 2.5e-159 566.2 507 61.9
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 3.2e-159 565.8 507 62.3
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 4.2e-159 565.5 507 62.5
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 2.1e-158 563.1 509 62.9
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 3.6e-158 562.4 391 77.0
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.8e-157 560.1 508 62.4
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 8.8e-157 557.8 507 61.7
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.6e-156 556.2 508 61.8
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.4e-156 555.4 508 62.0
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 4.4e-156 555.4 507 61.3
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 9.7e-156 554.3 537 60.3
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 2.2e-155 553.1 510 62.2
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 3.7e-155 552.4 508 61.6
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 4.8e-155 552.0 507 61.3
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 8.2e-155 551.2 508 61.2
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.1e-154 549.3 508 61.4
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.0e-153 546.6 508 61.2
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 7.7e-153 544.7 508 61.6
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 6.5e-152 541.6 511 60.1
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 3.2e-151 539.3 508 60.0
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 7.2e-151 538.1 508 60.0
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 6.1e-150 535.0 510 61.0
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 2.3e-149 533.1 535 57.4
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 6.8e-149 531.6 510 60.0
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 1.2e-148 530.8 508 59.8
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 4.4e-148 528.9 507 59.6
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 9.8e-148 527.7 508 58.5
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 6.3e-147 525.0 513 59.5
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.8e-146 523.5 508 59.1
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 3.1e-146 522.7 514 58.2
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 2.0e-145 520.0 392 71.4
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 2.7e-145 519.6 510 59.0
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 3.5e-145 519.2 517 58.6
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 3.5e-145 519.2 508 59.1
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 1.5e-143 513.8 514 57.6
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 1.5e-143 513.8 510 58.0
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 9.4e-143 511.1 512 60.5
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 9.4e-143 511.1 527 57.1
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 4.7e-142 508.8 540 55.4
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 6.1e-142 508.4 566 53.9
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 6.1e-142 508.4 508 57.5
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 2.3e-141 506.5 508 56.7
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 6.8e-141 505.0 538 55.9
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 2.0e-140 503.4 523 56.4
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.6e-140 503.1 572 54.2
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 7.5e-140 501.5 537 55.9
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 6.3e-139 498.4 515 57.1
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.8e-138 496.9 516 56.8
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 4.1e-138 495.7 544 54.2
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 3.5e-137 492.7 509 56.4
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 5.6e-135 485.3 509 57.0
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 2.0e-132 476.9 402 65.2
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 4.4e-132 475.7 555 52.3
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 7.5e-132 474.9 370 70.8
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 9.8e-132 474.6 536 52.8
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 8.3e-131 471.5 406 65.3
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 1.1e-130 471.1 354 72.6
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 1.8e-130 470.3 469 59.3
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 2.0e-129 466.8 511 56.4
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 7.8e-129 464.9 518 52.9
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 1.9e-127 460.3 389 64.5
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 1.5e-124 450.7 353 69.1
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.9e-122 443.7 510 53.3
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 4.1e-122 442.6 491 53.6
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 4.6e-121 439.1 433 59.1
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 2.3e-120 436.8 579 49.4
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 1.5e-119 434.1 556 49.1
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 4.3e-119 432.6 579 49.1
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 5.6e-119 432.2 398 59.5
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 7.3e-119 431.8 550 48.4
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.2e-118 431.0 519 52.8
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 1.6e-118 430.6 413 60.3
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 2.8e-118 429.9 517 51.6
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 6.2e-118 428.7 519 52.6
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 8.1e-118 428.3 375 63.2
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 3.1e-117 426.4 520 52.1
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 5.2e-117 425.6 402 60.7
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 8.9e-117 424.9 520 52.5
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 2.0e-116 423.7 510 50.4
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 1.1e-114 417.9 518 50.8
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 3.2e-114 416.4 520 51.3
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 5.4e-114 415.6 526 50.4
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 3.5e-113 412.9 393 61.1
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 1.5e-111 407.5 528 49.6
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 5.6e-111 405.6 322 67.7
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 2.8e-110 403.3 523 48.6
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 4.0e-109 399.4 399 58.1
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 6.8e-109 398.7 547 47.0
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 8.9e-109 398.3 578 45.7
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 3.4e-108 396.4 528 49.1
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 2.4e-106 390.2 597 44.7
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 7.1e-106 388.7 512 47.7
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 1.0e-104 384.8 530 49.6
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 8.9e-101 371.7 254 78.7
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 9.9e-100 368.2 596 41.9
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.6e-97 360.9 559 44.9
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 7.8e-97 358.6 555 44.9
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 1.1e-82 311.6 359 52.4
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 1.6e-70 271.2 257 59.5
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 3.7e-70 270.0 174 77.0
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 1.1e-69 268.5 200 71.0
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 1.5e-68 264.6 200 70.0
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 1.6e-65 254.6 193 69.4
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 7.9e-65 252.3 264 54.2
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 1.6e-62 244.6 294 50.0
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 3.7e-62 243.4 420 40.7
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 2.0e-52 211.1 438 37.0
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 5.7e-47 193.0 400 39.2
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 5.9e-44 183.0 266 44.4
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 1.3e-43 181.8 438 35.2
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 7.0e-37 159.5 101 79.2
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 4.2e-34 150.2 105 72.4
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 3.6e-33 147.1 424 33.0
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.5e-31 141.7 287 39.0
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 2.0e-31 141.4 431 32.9
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 2.4e-29 134.4 433 30.9
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 1.9e-26 124.8 143 51.7
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 4.0e-24 117.1 456 29.4
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 2.5e-18 97.8 80 66.2
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 8.3e-14 82.8 83 53.0
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 8.6e-11 72.8 41 80.5
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 3.3e-10 70.9 176 31.8
HPP92_012783 Vanilla planifolia HOM05D005852 ORTHO05D006688 2.1e-09 68.2 91 50.5
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 8.3e-06 56.2 152 28.9


User provided reference genes

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