Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 7.4e-56 220.3 113 100.0
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 5.2e-33 144.4 108 71.3
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 1.2e-32 143.3 112 68.8
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 3.4e-32 141.7 108 69.4
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 9.8e-32 140.2 110 69.1
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 9.8e-32 140.2 112 68.8
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 1.3e-31 139.8 111 71.2
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 2.2e-31 139.0 111 70.3
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 2.8e-31 138.7 111 70.3
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 8.3e-31 137.1 104 74.0
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 1.1e-30 136.7 108 66.7
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.8e-30 136.0 108 70.4
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 3.1e-30 135.2 106 67.9
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 3.1e-30 135.2 106 71.7
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 5.4e-30 134.4 108 68.5
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 5.4e-30 134.4 107 69.2
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 7.0e-30 134.0 109 67.9
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 9.2e-30 133.7 111 68.5
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 1.2e-29 133.3 108 68.5
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 1.2e-29 133.3 112 65.2
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.0e-29 132.5 104 71.2
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 3.5e-29 131.7 113 68.1
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.5e-29 131.3 108 64.8
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.5e-29 131.3 108 64.8
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 5.9e-29 131.0 110 67.3
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 5.9e-29 131.0 106 67.0
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 7.8e-29 130.6 109 67.0
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 1.0e-28 130.2 112 64.3
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.0e-28 130.2 104 66.3
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.3e-28 129.8 108 63.9
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.3e-28 129.8 108 68.5
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.3e-28 129.8 108 68.5
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.7e-28 129.4 110 66.4
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.7e-28 129.4 110 67.3
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 2.3e-28 129.0 113 63.7
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 2.9e-28 128.6 104 69.2
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 3.8e-28 128.3 110 64.5
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 5.0e-28 127.9 108 64.8
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 5.0e-28 127.9 108 64.8
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 6.6e-28 127.5 107 64.5
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.9e-27 125.9 108 61.1
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 1.9e-27 125.9 107 67.3
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 1.9e-27 125.9 110 64.5
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 2.5e-27 125.6 106 66.0
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 2.5e-27 125.6 115 57.4
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.5e-27 125.6 115 57.4
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 3.3e-27 125.2 108 63.0
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 3.3e-27 125.2 115 57.4
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 5.6e-27 124.4 111 64.0
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 5.6e-27 124.4 107 64.5
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 7.3e-27 124.0 106 62.3
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 1.2e-26 123.2 107 63.6
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 2.8e-26 122.1 108 63.0
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 3.6e-26 121.7 106 63.2
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.6e-26 121.7 107 62.6
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 1.4e-25 119.8 107 64.5
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 1.4e-25 119.8 106 62.3
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.8e-25 119.4 111 58.6
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 1.8e-25 119.4 98 69.4
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 3.0e-25 118.6 106 61.3
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.0e-25 118.6 105 60.0
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.0e-25 118.2 110 61.8
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 4.0e-25 118.2 110 61.8
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 5.2e-25 117.9 103 59.2
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 5.2e-25 117.9 110 61.8
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 5.2e-25 117.9 111 59.5
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 5.2e-25 117.9 111 59.5
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 6.8e-25 117.5 98 66.3
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 8.9e-25 117.1 108 58.3
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 8.9e-25 117.1 121 54.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 8.9e-25 117.1 110 58.2
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 1.2e-24 116.7 106 61.3
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 1.2e-24 116.7 104 57.7
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 2.6e-24 115.5 106 56.6
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 3.4e-24 115.2 118 55.1
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 3.4e-24 115.2 118 55.1
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 4.4e-24 114.8 106 58.5
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 5.7e-24 114.4 104 56.7
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 5.7e-24 114.4 105 61.9
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 1.3e-23 113.2 108 56.5
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 1.3e-23 113.2 104 56.7
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 2.2e-23 112.5 107 57.0
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 2.9e-23 112.1 116 55.2
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.7e-23 111.7 106 55.7
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 6.4e-23 110.9 113 55.8
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 8.3e-23 110.5 106 56.6
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 1.4e-22 109.8 116 53.4
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.4e-22 109.8 111 56.8
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 1.4e-22 109.8 110 54.5
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 3.2e-22 108.6 98 59.2
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 3.2e-22 108.6 117 55.6
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 4.1e-22 108.2 108 54.6
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 5.4e-22 107.8 111 54.1
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 5.4e-22 107.8 118 53.4
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 5.4e-22 107.8 118 53.4
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 5.4e-22 107.8 118 53.4
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 5.4e-22 107.8 114 51.8
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 7.0e-22 107.5 118 52.5
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 9.2e-22 107.1 112 53.6
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.6e-21 106.3 122 52.5
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 7.8e-21 104.0 103 53.4
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 7.8e-21 104.0 96 57.3
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 7.8e-21 104.0 112 51.8
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.3e-20 103.2 118 51.7
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 1.7e-20 102.8 111 53.2
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 3.0e-20 102.1 112 50.9
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 3.9e-20 101.7 108 52.8
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.9e-20 101.7 98 59.2
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 3.9e-20 101.7 106 53.8
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 5.0e-20 101.3 107 53.3
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 1.1e-19 100.1 118 50.8
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 1.1e-19 100.1 118 50.8
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.1e-19 100.1 94 53.2
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.5e-19 99.8 119 50.4
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 2.5e-19 99.0 116 49.1
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 9.5e-19 97.1 106 54.7
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 3.6e-18 95.1 108 49.1
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 4.7e-18 94.7 111 48.6
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 8.0e-18 94.0 113 51.3
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 1.4e-17 93.2 116 46.6
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 1.8e-17 92.8 115 47.0
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 6.8e-17 90.9 116 44.8
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 3.4e-16 88.6 107 45.8
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 4.4e-16 88.2 112 46.4
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.1e-11 73.6 66 60.6
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.1e-11 73.6 82 53.7
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 8.3e-07 57.4 56 58.9


User provided reference genes

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