Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 4.6e-262 907.5 515 100.0
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 6.4e-179 631.3 479 72.4
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 6.4e-179 631.3 526 71.7
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 3.9e-176 622.1 533 69.2
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 6.6e-176 621.3 531 69.7
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 5.2e-173 611.7 507 67.7
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 1.4e-170 603.6 477 69.2
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 2.4e-170 602.8 497 68.4
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 4.1e-170 602.1 471 73.7
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.0e-168 597.4 519 67.1
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 1.9e-167 593.2 490 71.0
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 9.5e-167 590.9 480 71.7
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 1.1e-165 587.4 518 67.8
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 1.8e-165 586.6 490 67.8
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 6.8e-165 584.7 484 67.8
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 1.5e-164 583.6 471 69.4
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 4.4e-164 582.0 490 69.8
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 4.2e-162 575.5 414 74.9
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 2.7e-161 572.8 580 60.5
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 7.8e-161 571.2 475 66.5
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 6.6e-160 568.2 493 67.1
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 2.1e-158 563.1 521 63.3
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 9.0e-157 557.8 523 64.8
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 1.2e-156 557.4 522 61.7
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.5e-156 557.0 523 64.8
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.5e-156 557.0 491 65.4
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 2.9e-155 552.7 518 61.0
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 3.8e-155 552.4 508 66.1
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 1.4e-154 550.4 517 62.3
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 2.4e-154 549.7 524 62.4
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 2.1e-153 546.6 522 61.1
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 6.0e-153 545.0 497 63.4
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.7e-152 543.5 530 61.5
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 1.7e-152 543.5 518 63.5
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.7e-152 543.5 509 65.0
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 8.7e-152 541.2 516 61.4
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.9e-151 540.0 416 69.0
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 4.3e-151 538.9 460 68.7
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 5.6e-151 538.5 409 72.1
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.3e-150 537.3 409 72.1
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 4.8e-150 535.4 525 63.0
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 1.1e-149 534.3 522 59.0
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.1e-149 534.3 506 61.5
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 1.8e-149 533.5 514 61.3
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 2.4e-149 533.1 523 62.3
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 6.9e-149 531.6 507 61.5
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 5.8e-148 528.5 504 60.9
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 9.9e-148 527.7 468 64.3
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 1.3e-147 527.3 523 60.8
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 2.9e-147 526.2 522 61.1
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 4.9e-147 525.4 523 62.3
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 6.4e-147 525.0 517 59.0
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 6.4e-147 525.0 517 59.0
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 6.4e-147 525.0 517 60.9
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 1.9e-146 523.5 530 61.5
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 1.2e-145 520.8 529 58.6
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 1.6e-145 520.4 519 59.7
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 7.9e-145 518.1 489 61.1
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 1.3e-144 517.3 525 58.1
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.8e-144 516.9 532 58.3
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 1.5e-143 513.8 525 59.8
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 1.5e-143 513.8 476 61.6
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 2.5e-143 513.1 537 56.8
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 5.6e-143 511.9 529 56.5
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 1.3e-142 510.8 528 61.2
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 1.6e-142 510.4 523 58.3
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.4e-141 507.3 517 61.5
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 4.0e-141 505.8 518 59.1
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 9.0e-141 504.6 454 62.6
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 9.0e-141 504.6 534 58.2
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 2.6e-140 503.1 528 60.2
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 5.8e-140 501.9 489 62.8
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.3e-139 500.7 528 58.7
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.3e-139 500.7 414 65.7
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.7e-139 500.4 477 60.8
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 3.8e-139 499.2 531 58.6
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 3.8e-139 499.2 517 59.0
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.8e-139 499.2 474 62.7
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 3.8e-139 499.2 483 58.2
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 2.5e-138 496.5 483 59.2
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.5e-138 496.5 470 61.5
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 3.2e-138 496.1 524 60.1
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 9.3e-138 494.6 534 54.9
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 1.2e-137 494.2 502 56.8
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 4.6e-137 492.3 399 68.9
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 1.0e-136 491.1 519 55.3
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 1.9e-135 486.9 522 58.6
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 3.3e-135 486.1 555 55.9
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 4.3e-135 485.7 413 66.8
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 2.1e-134 483.4 529 54.3
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 2.1e-134 483.4 529 54.3
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 8.2e-134 481.5 427 63.2
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 3.1e-133 479.6 395 65.6
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 3.1e-133 479.6 525 58.1
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 4.5e-132 475.7 522 57.5
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 2.2e-131 473.4 408 62.0
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 2.9e-131 473.0 519 55.9
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 3.5e-129 466.1 512 59.2
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 1.3e-128 464.2 523 59.3
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 3.0e-128 463.0 403 63.5
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 2.2e-126 456.8 386 64.5
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 2.4e-125 453.4 476 55.5
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 2.5e-122 443.4 391 63.7
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 9.4e-122 441.4 408 58.1
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 8.8e-120 434.9 388 60.8
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 1.1e-119 434.5 389 60.7
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 1.5e-119 434.1 475 54.5
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 6.9e-117 425.2 382 65.4
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 7.7e-116 421.8 404 64.6
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 3.3e-111 406.4 382 57.9
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.5e-108 397.5 375 62.1
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 5.9e-100 369.0 538 45.7
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 2.5e-98 363.6 556 46.6
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 2.0e-95 354.0 316 58.5
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 5.5e-90 335.9 318 67.3
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 8.0e-89 332.0 284 64.8
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 2.3e-88 330.5 284 64.4
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 4.8e-86 322.8 493 41.4
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 3.1e-85 320.1 475 42.9
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 8.6e-83 312.0 291 56.7
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.7e-81 306.2 365 54.5
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 3.2e-77 293.5 234 66.2
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 5.4e-77 292.7 339 53.7
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 3.7e-70 270.0 617 36.3
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 4.9e-70 269.6 304 52.6
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 1.6e-68 264.6 501 37.7
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 8.9e-64 248.8 178 75.3
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 2.1e-57 227.6 311 49.5
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 1.7e-51 208.0 468 37.0
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 4.2e-45 186.8 154 61.7
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 9.3e-45 185.7 145 67.6
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 7.8e-44 182.6 184 66.8
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 9.0e-40 169.1 160 59.4
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 3.6e-33 147.1 109 67.9
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 3.4e-31 140.6 108 69.4
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 3.4e-31 140.6 108 69.4
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 8.7e-27 125.9 126 54.0
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.5e-26 125.2 177 50.8
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 1.1e-21 109.0 192 54.2
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 2.3e-19 101.3 212 40.6
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 6.3e-17 93.2 57 78.9
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 4.1e-16 90.5 125 45.6
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 5.3e-16 90.1 70 67.1
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.2e-15 89.0 170 39.4
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 4.5e-15 87.0 75 62.7
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 7.6e-15 86.3 141 45.4
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.8e-14 84.0 119 47.9
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 2.5e-13 81.3 107 45.8
Sopen01g051070 Solanum pennellii HOM05D004816 ORTHO05D006043 9.3e-13 79.3 82 53.7
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 2.1e-12 78.2 112 51.8
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.2e-09 68.2 170 35.3
Cre06.g302850 Chlamydomonas reinhardtii HOM05D004816 ORTHO05D006043 2.4e-08 64.7 235 30.2
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 9.0e-08 62.8 165 32.1
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 5.9e-07 60.1 64 53.1
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 1.3e-06 58.9 99 46.5


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