Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 3.6e-143 511.5 255 100.0
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 3.6e-143 511.5 255 100.0
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 2.3e-129 465.7 254 90.2
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 1.1e-128 463.4 254 90.2
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 2.5e-128 462.2 255 89.0
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 3.3e-128 461.8 255 89.0
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 2.8e-127 458.8 256 89.1
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 1.8e-126 456.1 255 87.8
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 5.3e-126 454.5 254 87.8
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 9.0e-126 453.8 256 88.3
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 9.0e-126 453.8 256 88.3
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 9.0e-126 453.8 256 85.9
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 9.0e-126 453.8 255 88.6
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 1.5e-125 453.0 255 88.2
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.5e-125 453.0 255 87.8
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 3.4e-125 451.8 255 87.5
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.4e-125 451.8 276 83.0
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 3.4e-125 451.8 255 87.5
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 5.8e-125 451.1 255 85.5
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 7.6e-125 450.7 256 85.5
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.0e-124 450.3 255 86.7
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.0e-124 450.3 255 87.5
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 1.3e-124 449.9 255 85.5
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 2.2e-124 449.1 255 85.1
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 2.2e-124 449.1 255 87.5
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 2.2e-124 449.1 258 86.8
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 2.9e-124 448.7 255 84.7
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 6.5e-124 447.6 255 87.1
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 8.4e-124 447.2 255 84.3
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 1.9e-123 446.0 255 83.5
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 4.2e-123 444.9 256 86.3
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 4.2e-123 444.9 255 84.3
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 5.5e-123 444.5 255 85.5
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 7.1e-123 444.1 251 86.1
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 7.1e-123 444.1 251 86.1
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 7.1e-123 444.1 257 85.2
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 9.3e-123 443.7 258 85.3
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 1.6e-122 443.0 257 85.2
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 1.6e-122 443.0 255 85.5
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 2.7e-122 442.2 255 84.7
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 2.7e-122 442.2 258 84.5
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 2.7e-122 442.2 255 85.1
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 3.5e-122 441.8 255 83.1
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 3.5e-122 441.8 255 83.9
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 6.1e-122 441.0 255 83.5
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 6.1e-122 441.0 255 85.5
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.0e-121 440.3 255 83.5
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 1.8e-121 439.5 255 83.1
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 3.9e-121 438.3 255 82.7
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 5.1e-121 438.0 255 84.3
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 5.1e-121 438.0 255 84.3
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 6.7e-121 437.6 255 82.4
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 6.7e-121 437.6 259 82.6
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 6.7e-121 437.6 251 84.9
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 1.5e-120 436.4 255 82.4
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 1.9e-120 436.0 255 83.9
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 2.5e-120 435.6 255 82.7
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.5e-120 435.6 255 83.9
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 4.3e-120 434.9 255 84.7
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 5.7e-120 434.5 251 83.7
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 9.7e-120 433.7 251 83.3
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 9.7e-120 433.7 254 82.7
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 2.8e-119 432.2 255 82.4
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 4.8e-119 431.4 282 77.7
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 4.8e-119 431.4 251 82.5
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 1.4e-118 429.9 256 83.2
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 1.4e-118 429.9 255 80.4
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 4.1e-118 428.3 256 82.8
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 4.1e-118 428.3 251 82.5
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 6.9e-118 427.6 255 81.6
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 9.0e-118 427.2 255 82.0
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 1.2e-117 426.8 251 82.1
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 1.5e-117 426.4 263 80.6
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.5e-117 426.4 255 83.1
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 4.5e-117 424.9 239 83.7
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 4.5e-117 424.9 256 79.7
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 3.8e-116 421.8 283 75.6
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 5.5e-115 417.9 295 72.2
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.0e-113 412.1 252 82.1
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 6.7e-113 411.0 251 78.5
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 2.2e-111 406.0 251 76.9
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 2.8e-111 405.6 225 84.9
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 2.8e-111 405.6 251 77.7
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 9.1e-110 400.6 250 76.4
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 9.1e-110 400.6 226 83.6
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 1.3e-108 396.7 233 82.0
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 1.3e-108 396.7 233 82.0
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.8e-108 395.2 255 79.6
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 1.1e-104 383.6 256 74.6
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 1.5e-104 383.3 255 77.3
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 5.7e-104 381.3 221 81.4
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 7.4e-104 380.9 210 89.0
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 2.2e-103 379.4 251 74.9
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 1.4e-102 376.7 251 74.9
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 7.0e-102 374.4 211 86.3
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 9.1e-102 374.0 257 74.7
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 9.1e-102 374.0 454 49.1
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 1.7e-100 369.8 251 71.3
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 6.5e-100 367.9 283 69.6
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 1.9e-99 366.3 221 83.3
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 7.2e-99 364.4 259 75.7
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 1.8e-97 359.8 251 69.7
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 3.0e-97 359.0 251 69.7
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 3.5e-93 345.5 194 85.6
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 5.9e-93 344.7 210 78.6
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 4.2e-91 338.6 238 68.5
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 9.4e-91 337.4 253 66.8
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 2.7e-90 335.9 226 70.4
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 1.0e-89 334.0 251 69.3
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 6.8e-89 331.3 199 79.4
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 7.5e-88 327.8 256 68.8
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.1e-86 323.9 243 69.5
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 1.2e-82 310.5 251 61.8
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 4.7e-82 308.5 206 77.2
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 6.1e-82 308.1 269 62.5
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 2.4e-78 296.2 336 53.6
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.7e-76 290.0 270 60.0
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.9e-76 289.3 255 63.5
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 1.2e-74 283.9 161 83.9
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.8e-74 282.7 211 70.6
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 2.8e-71 272.7 161 83.2
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 9.2e-70 267.7 286 53.8
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.2e-69 267.3 209 66.0
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 2.0e-69 266.5 225 54.7
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 7.3e-67 258.1 173 75.7
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 4.7e-66 255.4 228 53.1
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 6.8e-65 251.5 145 87.6
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 6.8e-65 251.5 230 54.3
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 5.0e-60 235.3 206 60.2
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 6.2e-58 228.4 182 64.3
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.4e-54 217.2 148 71.6
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 3.7e-47 192.6 117 77.8
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 7.8e-45 184.9 112 76.8
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 7.8e-37 158.3 91 81.3
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 2.5e-35 153.3 84 91.7
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 1.4e-33 147.5 174 48.9
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 4.0e-33 146.0 95 73.7
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 2.0e-32 143.7 255 42.4
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-30 136.0 102 67.6
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 9.3e-14 81.6 54 72.2


User provided reference genes

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