Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1818 Cannabis sativa HOM05D007314 ORTHO05D003768 1.8e-78 295.8 144 100.0
ClCG05G014410 Citrullus lanatus HOM05D007314 ORTHO05D003768 4.2e-19 98.6 96 52.1
MELO3C028846.2 Cucumis melo HOM05D007314 ORTHO05D003768 7.1e-19 97.8 132 43.2
ClCG07G007700 Citrullus lanatus HOM05D007314 ORTHO05D003768 9.3e-19 97.4 86 54.7
MELO3C028271.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.2e-18 97.1 130 44.6
CsaV3_3G006830 Cucumis sativus L. HOM05D007314 ORTHO05D003768 1.6e-18 96.7 136 41.9
MELO3C027594.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.5e-18 95.5 126 44.4
Sed0011740 Sechium edule HOM05D007314 ORTHO05D003768 7.8e-18 94.4 140 40.0
MELO3C028434.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.7e-17 90.9 129 42.6
FvH4_4g12371 Fragaria vesca HOM05D007314 ORTHO05D003768 2.5e-16 89.4 83 48.2
MELO3C031887.2 Cucumis melo HOM05D007314 ORTHO05D003768 3.3e-16 89.0 76 53.9
MELO3C029981.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.6e-16 88.2 89 50.6
MELO3C030144.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.6e-16 88.2 85 47.1
MELO3C032718.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.6e-16 88.2 91 44.0
MELO3C001336.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.6e-16 87.4 114 37.7
MELO3C029040.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.1e-15 86.3 75 54.7
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 2.8e-15 85.9 109 42.2
RcHm_v2.0_Chr3g0458231 Rosa chinensis HOM05D007314 ORTHO05D003768 3.6e-15 85.5 107 43.0
MELO3C029411.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.8e-15 85.1 127 38.6
MELO3C035305.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.2e-15 84.7 89 48.3
RcHm_v2.0_Chr5g0064801 Rosa chinensis HOM05D007314 ORTHO05D003768 1.4e-14 83.6 125 33.6
RcHm_v2.0_Chr5g0059371 Rosa chinensis HOM05D007314 ORTHO05D003768 3.1e-14 82.4 83 45.8
MELO3C008679.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.3e-14 81.6 128 38.3
MELO3C035542.2 Cucumis melo HOM05D007314 ORTHO05D003768 5.3e-14 81.6 141 39.0
RcHm_v2.0_Chr3g0492801 Rosa chinensis HOM05D007314 ORTHO05D003768 9.0e-14 80.9 83 44.6
RcHm_v2.0_Chr7g0200591 Rosa chinensis HOM05D007314 ORTHO05D003768 1.2e-13 80.5 84 40.5
MELO3C035437.2 Cucumis melo HOM05D007314 ORTHO05D003768 2.6e-13 79.3 122 37.7
CsaV3_7G021120 Cucumis sativus L. HOM05D007314 ORTHO05D003768 2.6e-13 79.3 65 44.6
RcHm_v2.0_Chr4g0444771 Rosa chinensis HOM05D007314 ORTHO05D003768 1.3e-12 77.0 77 46.8
FvH4_5g18843 Fragaria vesca HOM05D008321 ORTHO05D003768 3.8e-12 75.5 78 41.0
CANSAT35G0660 Cannabis sativa HOM05D007314 ORTHO05D003768 4.9e-12 75.1 137 35.8
CsaV3_4G009050 Cucumis sativus L. HOM05D007314 ORTHO05D003768 6.4e-12 74.7 77 40.3
MELO3C032996.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.1e-11 73.9 100 40.0
FvH4_6g21082 Fragaria vesca HOM05D007314 ORTHO05D003768 1.4e-11 73.6 68 45.6
MELO3C030512.2 Cucumis melo HOM05D007314 ORTHO05D003768 1.9e-11 73.2 89 38.2
FvH4_4g01311 Fragaria vesca HOM05D007314 ORTHO05D003768 5.4e-11 71.6 103 36.9
MELO3C030644.2 Cucumis melo HOM05D007314 ORTHO05D003768 9.3e-11 70.9 69 39.1
FvH4_2g07142 Fragaria vesca HOM05D008321 ORTHO05D003768 9.3e-11 70.9 102 38.2
Sed0009392 Sechium edule HOM05D007314 ORTHO05D003768 9.3e-11 70.9 122 37.7
CSS0033678 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.2e-10 70.5 74 43.2
FvH4_6g17382 Fragaria vesca HOM05D008321 ORTHO05D003768 2.1e-10 69.7 79 39.2
CANSAT25G2929 Cannabis sativa HOM05D007314 ORTHO05D003768 4.6e-10 68.6 95 36.8
FAN18G4094 Fragaria x ananassa HOM05D008321 ORTHO05D003768 6.0e-10 68.2 76 39.5
FAN19G2766 Fragaria x ananassa HOM05D008321 ORTHO05D003768 7.9e-10 67.8 78 39.7
C09p36000 Brassica napus HOM05D007314 ORTHO05D003768 1.0e-09 67.4 81 32.1
CSS0045721 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 3.0e-09 65.9 73 41.1
FAN21G1044 Fragaria x ananassa HOM05D008321 ORTHO05D003768 3.0e-09 65.9 76 39.5
CSS0011924 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006706 8.7e-09 64.3 73 39.7
CSS0045228 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 1.1e-08 63.9 73 41.1
FvH4_3g21852 Fragaria vesca HOM05D008321 ORTHO05D003768 1.1e-08 63.9 81 40.7
Atru.chr2.2530 Acer truncatum HOM05D001899 ORTHO05D001858 1.5e-08 63.5 122 29.5
Aqoxy3G00743 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 1.5e-08 63.5 135 30.4
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.5e-08 63.5 99 34.3
RcHm_v2.0_Chr6g0269851 Rosa chinensis HOM05D008321 ORTHO05D003768 3.3e-08 62.4 119 28.6
RcHm_v2.0_Chr0c28g0501051 Rosa chinensis HOM05D008321 ORTHO05D003768 4.3e-08 62.0 99 30.3
Atru.chr7.467 Acer truncatum HOM05D000107 ORTHO05D000062 5.6e-08 61.6 75 40.0
CSS0040185 Camellia sinensis var. sinensis HOM05D007314 ORTHO05D003768 5.6e-08 61.6 132 34.1
FvH4_2g08144 Fragaria vesca HOM05D008321 ORTHO05D003768 9.6e-08 60.8 84 36.9
Aqoxy3G00744 Aquilegia oxysepala HOM05D053128 ORTHO05D003768 1.6e-07 60.1 90 34.4
FvH4_6g35541 Fragaria vesca HOM05D009091 ORTHO05D003768 1.6e-07 60.1 101 34.7
RcHm_v2.0_Chr7g0177401 Rosa chinensis HOM05D007314 ORTHO05D003768 2.1e-07 59.7 62 38.7
MELO3C033672.2 Cucumis melo HOM05D007314 ORTHO05D003768 4.8e-07 58.5 51 45.1
RcHm_v2.0_Chr5g0060161 Rosa chinensis HOM05D009091 ORTHO05D003768 4.8e-07 58.5 99 31.3
Aqoxy3G03529 Aquilegia oxysepala HOM05D007314 ORTHO05D003768 8.1e-07 57.8 79 35.4
Aqoxy5G02986 Aquilegia oxysepala HOM05D007314 ORTHO05D000285 8.1e-07 57.8 79 35.4
MELO3C035072.2 Cucumis melo HOM05D007314 ORTHO05D003768 8.1e-07 57.8 46 52.2
FvH4_3g45091 Fragaria vesca HOM05D009091 ORTHO05D003768 1.1e-06 57.4 99 33.3
BolC2t08290H Brassica oleracea HOM05D007314 ORTHO05D003768 1.4e-06 57.0 73 41.1
FvH4_4g06631 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-06 57.0 77 31.2
FvH4_4g16173 Fragaria vesca HOM05D008321 ORTHO05D003768 1.4e-06 57.0 79 36.7
FvH4_6g20172 Fragaria vesca HOM05D008321 ORTHO05D003768 2.4e-06 56.2 77 32.5
RcHm_v2.0_Chr2g0134701 Rosa chinensis HOM05D009091 ORTHO05D003768 2.4e-06 56.2 114 32.5
FvH4_5g23172 Fragaria vesca HOM05D008321 ORTHO05D003768 3.1e-06 55.8 72 40.3
PSO801G0005 Papaver somniferum HOM05D008526 ORTHO05D010380 4.0e-06 55.5 81 33.3
Rhsim01G0158900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-06 55.5 61 44.3
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 4.0e-06 55.5 74 44.6
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 4.0e-06 55.5 74 44.6
RcHm_v2.0_Chr1g0315701 Rosa chinensis HOM05D009091 ORTHO05D003768 5.3e-06 55.1 86 33.7
MELO3C034792.2 Cucumis melo HOM05D007314 ORTHO05D003768 6.9e-06 54.7 44 50.0
RcHm_v2.0_Chr3g0496641 Rosa chinensis HOM05D009091 ORTHO05D003768 9.0e-06 54.3 102 29.4


User provided reference genes

Program Settings