Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 3.9e-145 518.1 256 100.0
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 9.7e-136 486.9 256 92.2
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 8.2e-135 483.8 256 91.8
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 8.2e-135 483.8 256 91.8
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.1e-134 483.4 256 91.4
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 1.2e-133 479.9 255 91.0
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 2.6e-133 478.8 255 90.6
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 7.6e-133 477.2 256 89.5
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 3.8e-132 474.9 256 89.1
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 1.9e-131 472.6 257 89.5
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.2e-131 471.5 256 89.1
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 1.6e-130 469.5 257 89.1
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 3.6e-130 468.4 257 88.3
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 7.9e-130 467.2 256 87.5
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 7.9e-130 467.2 256 88.3
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 1.4e-129 466.5 257 88.3
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 3.9e-129 464.9 256 87.9
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 3.9e-129 464.9 257 87.9
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 5.1e-129 464.5 257 87.2
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 5.1e-129 464.5 256 87.5
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.1e-129 464.5 256 87.5
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.1e-129 464.5 256 87.5
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 8.8e-129 463.8 257 87.9
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 1.5e-128 463.0 257 87.5
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 1.9e-128 462.6 257 87.9
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 5.7e-128 461.1 257 87.2
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.7e-128 461.1 256 87.1
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 5.7e-128 461.1 255 87.1
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 9.7e-128 460.3 257 86.8
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 9.7e-128 460.3 257 87.2
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.3e-127 459.9 257 86.4
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 1.7e-127 459.5 257 87.5
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 2.8e-127 458.8 257 86.8
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 3.7e-127 458.4 255 86.7
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 4.8e-127 458.0 249 88.4
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 4.8e-127 458.0 249 88.4
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 4.8e-127 458.0 256 86.3
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 6.3e-127 457.6 257 87.2
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 6.3e-127 457.6 257 87.2
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 6.3e-127 457.6 255 86.7
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.1e-126 456.8 257 87.2
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 1.8e-126 456.1 255 87.5
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 1.8e-126 456.1 257 86.4
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 3.1e-126 455.3 257 85.6
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 4.5e-125 451.4 257 84.4
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 4.5e-125 451.4 257 86.4
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 1.0e-124 450.3 257 84.8
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 1.0e-124 450.3 257 84.8
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 1.7e-124 449.5 257 84.4
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 1.7e-124 449.5 255 85.9
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 3.8e-124 448.4 257 84.8
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 6.5e-124 447.6 257 84.4
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 4.2e-123 444.9 257 85.6
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 9.4e-123 443.7 257 84.4
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 2.7e-122 442.2 258 82.9
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 4.7e-122 441.4 255 85.1
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 4.7e-122 441.4 254 82.7
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 6.1e-122 441.0 256 85.2
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.0e-121 440.3 264 81.8
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 1.8e-121 439.5 257 83.3
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 3.9e-121 438.3 255 84.3
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 5.1e-121 438.0 256 83.2
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 8.8e-121 437.2 257 83.7
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 2.0e-120 436.0 256 82.8
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 3.3e-120 435.3 263 81.4
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 9.7e-120 433.7 271 79.0
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 83.3
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 83.3
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.3e-119 433.3 257 83.3
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 3.7e-119 431.8 257 82.5
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 8.2e-119 430.6 257 81.3
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.1e-118 430.3 271 77.9
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 1.1e-118 430.3 257 81.3
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 1.4e-118 429.9 302 72.2
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 81.3
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 81.3
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 81.3
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 81.3
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.8e-118 429.5 257 81.3
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 4.1e-118 428.3 257 80.9
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 2.0e-117 426.0 257 80.2
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 2.0e-117 426.0 257 80.2
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 3.4e-117 425.2 257 80.5
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 3.4e-117 425.2 257 80.5
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 4.5e-117 424.9 257 80.2
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 7.7e-117 424.1 230 89.1
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 1.7e-116 422.9 255 82.7
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 3.8e-116 421.8 257 78.6
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 2.5e-115 419.1 255 79.6
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 4.2e-115 418.3 257 79.8
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 5.5e-115 417.9 252 81.3
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 79.0
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.4e-110 403.3 280 75.7
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 2.0e-109 399.4 249 77.9
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 7.7e-109 397.5 250 76.8
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 9.4e-107 390.6 257 73.9
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 8.0e-106 387.5 214 85.5
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 9.7e-104 380.6 231 77.5
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 1.2e-101 373.6 255 76.1
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 3.5e-101 372.1 214 82.7
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 1.3e-100 370.2 257 73.9
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.2e-98 363.6 222 78.8
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 2.0e-96 356.3 255 69.8
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 6.3e-95 351.3 251 69.3
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 2.3e-92 342.8 198 84.8
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 8.6e-92 340.9 247 68.4
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 7.2e-91 337.8 250 66.8
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 2.8e-87 325.9 198 77.8
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 1.8e-86 323.2 251 65.3
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 5.4e-78 295.0 159 88.7
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 7.8e-69 264.6 170 73.5
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 3.6e-66 255.8 153 79.7
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 1.8e-65 253.4 132 91.7
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 1.2e-64 250.8 142 85.2
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 4.1e-62 242.3 254 50.4
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 3.5e-61 239.2 248 48.4
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 6.0e-61 238.4 208 63.5
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 6.8e-57 224.9 130 82.3
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 6.0e-53 211.8 112 90.2
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.7e-52 210.3 272 41.9
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.1e-51 207.6 116 81.0
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 6.2e-50 201.8 114 84.2
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 4.0e-49 199.1 105 91.4
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 1.5e-48 197.2 156 63.5
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 3.4e-48 196.1 105 88.6
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 8.7e-44 181.4 257 45.1
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 2.5e-43 179.9 105 82.9
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 5.6e-43 178.7 105 81.9
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 6.9e-41 171.8 104 80.8
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 3.9e-36 156.0 179 50.3
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 4.8e-34 149.1 91 73.6
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 6.7e-28 128.6 67 94.0
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.6e-26 124.0 102 61.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.1e-25 119.8 96 63.5
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 1.7e-23 114.0 59 91.5
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 7.2e-14 82.0 55 69.1
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 2.7e-13 80.1 60 70.0
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 1.8e-09 67.4 40 85.0


User provided reference genes

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