Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 0.0e+00 1352.0 751 100.0
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 5.0e-156 555.8 843 47.6
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 5.0e-156 555.8 788 51.4
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 5.7e-152 542.3 881 46.8
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 2.9e-148 530.0 764 49.1
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 1.6e-141 507.7 776 46.8
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 4.7e-138 496.1 844 46.7
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.4e-137 494.6 774 46.3
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 3.0e-137 493.4 812 45.9
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 9.7e-136 488.4 873 45.0
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 4.8e-135 486.1 812 45.9
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 4.8e-135 486.1 772 46.4
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 6.5e-132 475.7 813 44.4
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 1.0e-129 468.4 651 50.5
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 1.8e-129 467.6 822 46.6
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 1.8e-129 467.6 782 46.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 1.4e-126 458.0 794 43.8
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.2e-125 454.9 868 41.1
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 1.7e-124 451.1 797 46.9
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 5.0e-124 449.5 778 45.8
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 1.5e-123 448.0 778 45.6
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 4.2e-123 446.4 770 46.0
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 5.5e-123 446.0 772 45.9
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 3.6e-122 443.4 808 42.3
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 3.6e-122 443.4 767 44.1
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 3.6e-122 443.4 770 43.9
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 1.4e-121 441.4 773 45.7
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 3.0e-121 440.3 780 46.0
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 6.8e-121 439.1 813 44.6
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.4e-120 436.8 780 44.6
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 2.4e-118 430.6 793 42.9
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 4.1e-118 429.9 742 43.9
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.7e-117 427.2 819 41.9
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.3e-116 424.1 845 41.8
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 2.3e-116 424.1 821 42.8
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 6.6e-116 422.5 814 42.0
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 2.5e-115 420.6 777 43.4
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 4.3e-115 419.9 805 43.7
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 5.2e-113 412.9 754 43.4
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 5.2e-113 412.9 785 43.3
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 8.9e-113 412.1 778 43.3
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 1.1e-110 405.2 769 43.7
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 2.4e-110 404.1 726 43.8
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 2.7e-109 400.6 823 40.8
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 6.6e-108 396.0 576 46.2
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.1e-107 395.2 838 39.6
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 4.7e-106 389.8 774 40.8
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 6.2e-106 389.4 812 42.7
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 6.2e-106 389.4 786 39.1
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.8e-105 387.9 825 39.5
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 2.3e-105 387.5 781 40.5
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.5e-104 384.8 792 42.7
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 4.4e-104 383.3 626 45.4
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 4.4e-104 383.3 798 42.5
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 7.5e-104 382.5 781 41.9
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.4e-102 378.3 723 41.4
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 2.0e-101 374.4 781 43.1
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 1.7e-100 371.3 798 39.2
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.5e-96 358.2 686 40.7
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 9.8e-96 355.5 547 46.1
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 2.2e-95 354.4 683 40.4
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 4.1e-94 350.1 846 39.5
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 3.9e-92 343.6 643 44.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 6.6e-92 342.8 817 39.8
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 8.6e-92 342.4 807 40.8
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 4.3e-91 340.1 593 45.0
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.4e-89 335.1 588 41.5
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 5.2e-89 333.2 787 38.2
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 2.0e-88 331.3 763 38.1
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 3.4e-88 330.5 817 38.9
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 2.4e-86 324.3 588 43.0
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 7.1e-86 322.8 618 41.6
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 1.2e-85 322.0 622 40.0
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 1.0e-84 318.9 786 36.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 5.2e-81 306.6 832 34.7
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 6.9e-81 306.2 291 62.9
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.5e-80 305.1 579 42.7
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.1e-77 294.7 561 42.6
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.1e-77 294.7 561 42.6
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.9e-75 288.1 737 36.9
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.2e-69 268.9 624 37.3
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 3.9e-68 263.8 602 39.2
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 2.8e-66 257.7 833 34.2
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.1e-65 255.8 600 37.7
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 1.8e-65 255.0 822 34.5
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 3.4e-64 250.8 830 33.6
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.3e-63 248.8 789 32.7
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 6.4e-63 246.5 601 36.9
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 1.4e-62 245.4 593 35.8
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 2.3e-60 238.0 832 33.9
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.1e-57 229.2 638 37.6
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 1.4e-57 228.8 563 37.1
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 2.4e-57 228.0 607 38.2
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 2.4e-57 228.0 607 38.2
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 4.0e-57 227.3 706 33.7
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 2.0e-56 224.9 844 32.2
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.7e-55 221.9 602 36.0
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 6.5e-55 219.9 689 31.5
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.0e-52 212.6 553 37.4
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 1.3e-52 212.2 766 30.5
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 1.5e-51 208.8 759 31.9
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.1e-49 202.6 731 33.2
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.1e-46 192.6 543 33.9
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 4.8e-42 177.2 694 30.5
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 9.4e-38 162.9 517 33.8
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 7.9e-37 159.8 611 28.8
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 5.3e-33 147.1 521 32.1
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 1.4e-30 139.0 403 35.2
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 3.9e-28 131.0 207 43.5
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 2.4e-25 121.7 556 28.6
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.3e-18 99.4 808 26.5
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.3e-18 99.4 808 26.5
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.2e-13 82.8 181 39.8
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 3.1e-09 68.2 147 39.5
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 1.2e-08 66.2 79 51.9
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 7.2e-06 57.0 234 32.1


User provided reference genes

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