Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 6.7e-96 354.0 175 100.0
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 8.5e-59 230.7 173 71.1
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 2.3e-56 222.6 162 70.4
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 1.2e-55 220.3 179 67.6
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 9.8e-55 217.2 179 65.9
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.7e-54 215.3 175 66.3
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 6.3e-54 214.5 175 66.9
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 1.8e-53 213.0 158 68.4
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 7.0e-53 211.1 170 65.9
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 9.1e-53 210.7 175 66.9
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 9.1e-53 210.7 149 68.5
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.2e-52 210.3 176 63.1
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 2.0e-52 209.5 171 63.7
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 2.7e-52 209.1 177 66.1
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.7e-52 209.1 175 65.1
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.3e-51 206.8 175 64.6
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.9e-50 203.0 156 69.2
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 3.2e-50 202.2 170 61.8
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 2.1e-49 199.5 140 69.3
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 3.6e-49 198.7 176 60.2
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 4.7e-49 198.4 138 68.8
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 8.0e-49 197.6 180 61.7
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 1.4e-48 196.8 155 65.8
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.4e-48 196.8 163 65.6
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 5.2e-48 194.9 159 63.5
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 6.8e-48 194.5 155 64.5
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 1.2e-47 193.7 180 59.4
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.2e-47 193.7 130 73.1
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 2.6e-47 192.6 177 61.0
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 2.6e-47 192.6 165 58.2
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 2.6e-47 192.6 155 64.5
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.6e-47 192.6 179 60.9
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 4.4e-47 191.8 155 64.5
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 7.5e-47 191.0 106 84.0
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.3e-46 190.3 140 69.3
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 1.7e-46 189.9 155 65.2
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 2.2e-46 189.5 139 69.8
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 2.2e-46 189.5 179 59.2
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 3.7e-46 188.7 147 66.0
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 3.1e-45 185.7 185 55.7
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 4.1e-45 185.3 143 65.7
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 5.4e-45 184.9 173 59.0
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 9.1e-45 184.1 177 58.8
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 1.2e-44 183.7 151 62.3
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 1.6e-44 183.3 157 58.0
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 2.0e-44 183.0 165 59.4
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 3.5e-44 182.2 178 56.7
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 5.9e-44 181.4 174 58.0
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 1.3e-43 180.3 172 53.5
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 2.3e-43 179.5 106 78.3
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 2.3e-43 179.5 114 71.9
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 6.6e-43 177.9 167 55.7
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 6.6e-43 177.9 112 75.0
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 6.6e-43 177.9 182 56.0
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 6.6e-43 177.9 114 71.1
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 8.6e-43 177.6 169 56.8
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 1.5e-42 176.8 149 59.1
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 2.5e-42 176.0 210 51.0
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 4.2e-42 175.3 107 72.9
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 7.2e-42 174.5 145 62.8
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 1.2e-41 173.7 152 58.6
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 1.2e-41 173.7 118 67.8
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 1.2e-41 173.7 169 53.8
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.6e-41 173.3 166 54.8
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 2.8e-41 172.6 165 53.3
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 3.6e-41 172.2 166 54.2
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 3.6e-41 172.2 165 53.3
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 3.6e-41 172.2 165 53.3
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 8.0e-41 171.0 130 64.6
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 2.3e-40 169.5 172 51.7
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 2.3e-40 169.5 164 53.0
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 2.3e-40 169.5 172 51.7
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 2.3e-40 169.5 172 51.7
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 2.3e-40 169.5 164 53.0
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 5.2e-40 168.3 170 52.4
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 5.2e-40 168.3 172 51.7
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 3.4e-39 165.6 192 52.6
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 3.4e-39 165.6 100 76.0
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 2.9e-38 162.5 134 60.4
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.9e-38 162.5 176 50.0
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 4.1e-37 158.7 194 52.1
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 2.7e-36 156.0 137 56.9
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 1.5e-34 150.2 93 75.3
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 1.2e-33 147.1 113 67.3
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 1.6e-33 146.7 139 56.1
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 2.8e-33 146.0 89 76.4
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 6.2e-33 144.8 146 55.5
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 3.1e-32 142.5 104 67.3
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 3.1e-32 142.5 110 69.1
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.2e-31 140.6 140 56.4
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 3.4e-31 139.0 138 56.5
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 4.4e-31 138.7 145 51.7
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 1.3e-30 137.1 142 52.1
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 1.7e-30 136.7 107 54.2
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 4.9e-30 135.2 94 64.9
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 1.9e-29 133.3 105 58.1
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 2.4e-29 132.9 94 67.0
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 4.7e-25 118.6 73 75.3
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 3.7e-22 109.0 76 65.8
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 5.1e-19 98.6 105 60.0
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 6.6e-19 98.2 61 75.4
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 3.3e-18 95.9 75 60.0
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 6.2e-17 91.7 177 40.1
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 6.8e-16 88.2 60 73.3
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 2.2e-14 83.2 179 41.9
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 3.2e-13 79.3 109 49.5
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 7.8e-12 74.7 52 67.3


User provided reference genes

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