Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 7.5e-158 560.5 279 100.0
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 3.8e-101 372.1 273 68.1
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 2.4e-100 369.4 270 66.7
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 1.6e-99 366.7 279 64.9
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 3.5e-99 365.5 260 68.8
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 7.9e-99 364.4 256 69.5
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 1.1e-97 360.5 259 67.6
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 1.5e-97 360.1 269 64.7
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 1.5e-97 360.1 262 67.2
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 2.5e-97 359.4 279 65.2
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 2.5e-97 359.4 259 68.3
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 2.8e-96 355.9 260 69.2
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 3.7e-96 355.5 275 66.5
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 1.4e-95 353.6 245 70.2
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 1.4e-95 353.6 263 65.0
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 1.4e-95 353.6 255 67.8
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.5e-94 350.1 261 66.7
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 4.5e-94 348.6 251 67.7
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 1.0e-93 347.4 274 63.9
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 2.5e-92 342.8 259 64.5
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 3.2e-92 342.4 261 65.1
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 1.2e-91 340.5 295 59.7
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 2.1e-91 339.7 254 65.0
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 2.7e-91 339.3 259 66.0
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 4.6e-91 338.6 282 61.3
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 4.6e-91 338.6 251 67.7
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 7.9e-91 337.8 287 59.6
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 1.0e-90 337.4 252 66.7
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 1.3e-90 337.0 274 63.5
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 1.8e-90 336.7 244 68.9
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 3.0e-90 335.9 265 62.6
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 3.9e-90 335.5 265 63.8
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 6.7e-90 334.7 250 66.4
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 6.7e-90 334.7 246 66.7
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 1.9e-89 333.2 265 63.0
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 5.7e-89 331.6 265 63.0
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 9.6e-89 330.9 235 69.8
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 1.3e-88 330.5 261 62.5
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 2.1e-88 329.7 269 61.3
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 2.8e-88 329.3 280 60.0
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 4.8e-88 328.6 267 59.9
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 4.8e-88 328.6 267 59.9
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 6.3e-88 328.2 250 65.2
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 6.3e-88 328.2 265 61.9
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 8.2e-88 327.8 264 61.0
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 2.4e-87 326.2 299 58.5
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 4.1e-87 325.5 252 61.9
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 1.2e-86 323.9 278 59.0
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 1.2e-86 323.9 274 59.5
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.0e-86 323.2 266 59.0
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 2.0e-86 323.2 266 60.9
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 2.6e-86 322.8 264 62.1
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 2.6e-86 322.8 251 63.7
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 3.4e-86 322.4 289 57.4
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 3.4e-86 322.4 261 63.6
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 5.9e-86 321.6 250 64.0
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 1.3e-85 320.5 254 63.4
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 5.0e-85 318.5 267 61.4
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 3.2e-84 315.8 259 61.8
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 3.2e-84 315.8 249 65.5
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 1.2e-83 313.9 256 63.7
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 3.6e-83 312.4 266 58.3
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 6.1e-83 311.6 269 60.6
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 7.9e-83 311.2 268 60.8
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 1.6e-80 303.5 265 60.8
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 6.3e-80 301.6 231 64.1
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 1.4e-79 300.4 264 58.7
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 2.6e-78 296.2 244 60.7
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 2.6e-78 296.2 251 59.0
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 1.0e-77 294.3 247 61.9
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 2.2e-77 293.1 257 58.8
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 5.0e-77 292.0 269 58.7
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 6.5e-77 291.6 252 60.3
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 1.0e-74 284.3 260 56.9
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 1.0e-74 284.3 254 55.1
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 6.7e-74 281.6 227 64.8
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 1.1e-73 280.8 254 57.9
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 2.2e-72 276.6 252 52.4
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 2.8e-72 276.2 251 59.4
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 6.9e-71 271.6 207 66.2
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 9.1e-71 271.2 197 67.5
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 1.2e-70 270.8 245 58.4
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 5.9e-70 268.5 222 61.7
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 1.7e-69 266.9 250 57.6
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 4.2e-68 262.3 248 51.2
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 7.2e-68 261.5 209 60.3
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.7e-67 259.6 390 41.3
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.3e-64 250.8 281 49.8
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.3e-64 250.8 281 49.8
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 3.7e-64 249.2 249 55.4
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 2.6e-62 243.0 213 55.4
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 2.2e-61 240.0 210 57.6
HanXRQChr13g0419831 Helianthus annuus HOM05D006099 ORTHO05D007317 1.4e-58 230.7 150 70.0
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 1.3e-56 224.2 265 49.4
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 1.7e-56 223.8 263 48.3
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 1.7e-56 223.8 190 62.6
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 6.1e-51 205.3 178 59.0
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 1.8e-50 203.8 241 48.5
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 2.8e-48 196.4 159 61.6
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 9.1e-47 191.4 159 61.6
CDE06G2693 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 8.6e-45 184.9 204 47.1
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 1.5e-44 184.1 150 63.3
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 2.1e-43 180.3 149 63.1
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 3.0e-42 176.4 132 68.9
unitig_32.g10951 Utricularia gibba HOM05D006099 ORTHO05D007317 4.4e-41 172.6 125 63.2
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 3.7e-40 169.5 148 59.5
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 6.3e-40 168.7 148 59.5
CARHR239060 Cardamine hirsuta HOM05D006099 ORTHO05D007317 1.1e-39 167.9 117 65.0
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 1.4e-39 167.5 163 55.8
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 1.8e-39 167.2 113 71.7
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 2.4e-39 166.8 142 60.6
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 5.4e-39 165.6 148 58.8
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 4.3e-36 156.0 131 61.1
MCO10G112 Micromonas commoda HOM05D006099 ORTHO05D007317 8.9e-34 148.3 290 34.1
Migut.A00464 Erythranthe guttata HOM05D006099 ORTHO05D007317 3.2e-31 139.8 142 50.7
TPR.G30957 Trifolium pratense HOM05D006099 ORTHO05D007317 1.2e-30 137.9 96 66.7
Nitab4.5_0001327g0030 Nicotiana tabacum HOM05D006099 ORTHO05D007317 7.8e-30 135.2 132 53.0
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 1.4e-26 124.4 288 30.9
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 2.3e-26 123.6 240 35.0
HPP92_011638 Vanilla planifolia HOM05D006099 ORTHO05D007317 1.5e-25 120.9 72 73.6
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 1.3e-24 117.9 110 53.6
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 2.2e-24 117.1 109 56.9
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 3.2e-23 113.2 124 50.0
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 1.2e-22 111.3 100 53.0
SHI15000 Sapria himalayana HOM05D000105 ORTHO05D000023 3.9e-21 106.3 166 40.4
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 1.9e-20 104.0 97 58.8
TPR.G3995 Trifolium pratense HOM05D006099 ORTHO05D007317 3.3e-20 103.2 56 80.4
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 9.5e-20 101.7 103 50.5
HPP92_011640 Vanilla planifolia HOM05D006099 ORTHO05D007317 2.8e-19 100.1 76 59.2
QL02p066379 Quercus lobata HOM05D006099 ORTHO05D007317 1.5e-17 94.4 62 64.5
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 4.0e-10 69.7 64 51.6
SHI14999 Sapria himalayana HOM05D005377 ORTHO05D003034 8.4e-08 62.0 43 65.1
SalBow8G2774 Salvia bowleyana HOM05D002799 ORTHO05D007076 2.1e-06 57.4 33 75.8


User provided reference genes

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