Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1466 Cannabis sativa HOM05D008022 ORTHO05D010147 7.9e-77 290.8 198 100.0
MD15G1017600 Malus domestica HOM05D008022 ORTHO05D010147 8.5e-23 111.3 62 71.0
CiPaw.07G154400 Carya illinoinensis HOM05D008022 ORTHO05D010147 5.5e-22 108.6 60 78.3
Sed0002960 Sechium edule HOM05D008022 ORTHO05D010147 5.5e-22 108.6 64 71.9
CSS0048901 Camellia sinensis var. sinensis HOM05D008022 ORTHO05D010147 7.2e-22 108.2 63 69.8
Cfa013902 Carpinus fangiana HOM05D002906 ORTHO05D003211 9.4e-22 107.8 60 75.0
CiPaw.08G062600 Carya illinoinensis HOM05D008022 ORTHO05D010147 1.2e-21 107.5 202 59.9
Manes.05G152650 Manihot esculenta HOM05D008022 ORTHO05D010147 1.6e-21 107.1 58 75.9
TWI12G0111 Tripterygium wilfordii HOM05D008022 ORTHO05D010147 2.7e-21 106.3 66 71.2
Gohir.A05G188500 Gossypium hirsutum HOM05D008022 ORTHO05D010147 4.7e-21 105.5 55 80.0
Gohir.D05G191600 Gossypium hirsutum HOM05D008022 ORTHO05D010147 4.7e-21 105.5 55 80.0
Potri.005G234601 Populus trichocarpa HOM05D008022 ORTHO05D010147 8.0e-21 104.8 61 70.5
Gorai.009G196900 Gossypium raimondii HOM05D008022 ORTHO05D010147 1.4e-20 104.0 55 80.0
Eucgr.F01845 Eucalyptus grandis HOM05D008022 ORTHO05D010147 1.8e-20 103.6 66 66.7
Atru.chr13.362 Acer truncatum HOM05D008022 ORTHO05D010147 2.3e-20 103.2 63 68.3
Lj1g0009874 Lotus japonicus HOM05D008022 ORTHO05D010147 2.3e-20 103.2 79 59.5
Phvul.001G009600 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 2.3e-20 103.2 69 66.7
Medtr1g023270 Medicago truncatula HOM05D008022 ORTHO05D010147 4.0e-20 102.4 74 64.9
Cpa.g.sc140.17 Carica papaya HOM05D008022 ORTHO05D010147 6.8e-20 101.7 64 68.8
CsaV3_7G006070 Cucumis sativus L. HOM05D008022 ORTHO05D010147 8.8e-20 101.3 69 68.1
Lj5g0000972 Lotus japonicus HOM05D008022 ORTHO05D010147 1.2e-19 100.9 64 71.9
Glyma.14G216600 Glycine max HOM05D008022 ORTHO05D010147 1.5e-19 100.5 71 62.0
Psat6g005360 Pisum sativum HOM05D008022 ORTHO05D010147 3.4e-19 99.4 47 83.0
Lalb_Chr22g0354471 Lupinus albus HOM05D008022 ORTHO05D010147 4.4e-19 99.0 63 73.0
TPR.G40293 Trifolium pratense HOM05D008022 ORTHO05D010147 7.5e-19 98.2 69 66.7
Lalb_Chr08g0246011 Lupinus albus HOM05D008022 ORTHO05D010147 1.7e-18 97.1 75 60.0
Medtr3g113080 Medicago truncatula HOM05D008022 ORTHO05D010147 2.2e-18 96.7 48 75.0
FvH4_2g39010 Fragaria vesca HOM05D008022 ORTHO05D010147 4.8e-18 95.5 59 67.8
Nitab4.5_0000493g0010 Nicotiana tabacum HOM05D008022 ORTHO05D010147 4.8e-18 95.5 45 82.2
Duzib041G0305 Durio zibethinus HOM05D008022 ORTHO05D010147 6.3e-18 95.1 42 90.5
ECA236G3926 Erigeron canadensis HOM05D008022 ORTHO05D010147 6.3e-18 95.1 59 64.4
PGR031G0261 Punica granatum HOM05D008022 ORTHO05D010147 8.3e-18 94.7 60 65.0
arahy.Tifrunner.gnm1.ann1.RV6KDM Arachis hypogaea HOM05D008022 ORTHO05D010147 1.1e-17 94.4 64 59.4
Glyma.17G255200 Glycine max HOM05D008022 ORTHO05D010147 1.4e-17 94.0 62 64.5
Cc10_g02120 Coffea canephora HOM05D008022 ORTHO05D010147 2.0e-16 90.1 64 62.5
Nn5g29204 Nelumbo nucifera HOM05D008022 ORTHO05D010147 2.0e-16 90.1 65 61.5
arahy.Tifrunner.gnm1.ann1.QUSF5W Arachis hypogaea HOM05D008022 ORTHO05D010147 3.5e-16 89.4 60 61.7
VMungo1309G0619 Vigna mungo HOM05D002906 ORTHO05D003211 5.9e-16 88.6 64 54.7
Lsat_1_v5_gn_7_91921 Lactuca sativa HOM05D008022 ORTHO05D010147 1.0e-15 87.8 72 52.8
EL10Ac1g00558 Beta vulgaris HOM05D008022 ORTHO05D010147 5.0e-15 85.5 47 70.2
MELO3C018685.2 Cucumis melo HOM05D008022 ORTHO05D010147 8.5e-15 84.7 66 59.1
C06p49540 Brassica napus HOM05D008022 ORTHO05D010147 4.7e-13 79.0 55 54.5
BolC6t39993H Brassica oleracea HOM05D008022 ORTHO05D010147 4.7e-13 79.0 55 54.5
AL2G35530 Arabidopsis lyrata HOM05D008022 ORTHO05D010147 8.0e-13 78.2 47 59.6
FAN27G1447 Fragaria x ananassa HOM05D008022 ORTHO05D010147 8.0e-13 78.2 54 59.3
arahy.Tifrunner.gnm1.ann1.0AGT2R Arachis hypogaea HOM05D008022 ORTHO05D010147 1.0e-12 77.8 44 63.6
C02p34060 Brassica napus HOM05D008022 ORTHO05D010147 1.4e-12 77.4 55 54.5
BraA02t07039Z Brassica rapa HOM05D008022 ORTHO05D010147 1.4e-12 77.4 64 51.6
BraA07t31648Z Brassica rapa HOM05D008022 ORTHO05D010147 1.4e-12 77.4 64 51.6
A02p20010 Brassica napus HOM05D008022 ORTHO05D010147 1.8e-12 77.0 47 57.4
BolC2t09304H Brassica oleracea HOM05D008022 ORTHO05D010147 1.8e-12 77.0 47 57.4
PSO541G2481 Papaver somniferum HOM05D008022 ORTHO05D010147 2.3e-12 76.6 43 67.4
BcaC08g47037 Brassica carinata HOM05D008022 ORTHO05D010147 5.2e-12 75.5 64 50.0
BcaC08g47337 Brassica carinata HOM05D008022 ORTHO05D010147 5.2e-12 75.5 64 50.0
BcaC08g47338 Brassica carinata HOM05D008022 ORTHO05D010147 5.2e-12 75.5 64 50.0
BcaC08g45567 Brassica carinata HOM05D008022 ORTHO05D010147 6.8e-12 75.1 55 52.7
C06p32520 Brassica napus HOM05D008022 ORTHO05D010147 6.8e-12 75.1 55 52.7
BolC6t38374H Brassica oleracea HOM05D008022 ORTHO05D010147 6.8e-12 75.1 55 52.7
HPP92_017807 Vanilla planifolia HOM05D008022 ORTHO05D010147 6.8e-12 75.1 58 53.4
BcaB05g24920 Brassica carinata HOM05D008022 ORTHO05D010147 1.2e-11 74.3 47 55.3
A07p41120 Brassica napus HOM05D008022 ORTHO05D010147 1.2e-11 74.3 64 50.0
CARHR068950 Cardamine hirsuta HOM05D008022 ORTHO05D010147 1.5e-11 73.9 47 55.3
Prupe.1G370900 Prunus persica HOM05D008022 ORTHO05D010147 1.5e-11 73.9 39 71.8
Carub.0002s2241 Capsella rubella HOM05D008022 ORTHO05D010147 2.0e-11 73.6 47 55.3
BraA07t30517Z Brassica rapa HOM05D008022 ORTHO05D010147 5.7e-11 72.0 47 53.2
Aqoxy6G02393 Aquilegia oxysepala HOM05D008022 ORTHO05D010147 2.8e-10 69.7 60 50.0
unitig_8.g4921 Utricularia gibba HOM05D008022 ORTHO05D010147 1.1e-09 67.8 54 53.7
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 2.4e-09 66.6 33 78.8
CDE02G3345 Ceratophyllum demersum HOM05D008022 ORTHO05D010147 5.4e-09 65.5 57 47.4
Phvul.009G014200 Phaseolus vulgaris HOM05D008022 ORTHO05D010147 2.3e-07 60.1 66 42.4


User provided reference genes

Program Settings