Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 9.2e-198 693.3 346 100.0
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 4.8e-130 468.4 343 66.2
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 1.8e-129 466.5 345 65.2
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 2.4e-129 466.1 345 66.7
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 3.1e-129 465.7 345 66.7
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.1e-129 465.7 345 66.7
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 5.3e-129 464.9 345 65.2
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 6.9e-129 464.5 344 66.0
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 2.0e-128 463.0 347 68.9
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 2.6e-128 462.6 358 63.1
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.4e-128 462.2 345 66.4
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 4.5e-128 461.8 352 66.2
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 2.2e-127 459.5 346 64.5
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 2.9e-127 459.1 344 64.5
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.4e-126 456.8 352 65.9
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 2.5e-126 456.1 346 68.8
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 3.2e-126 455.7 343 64.1
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 5.5e-126 454.9 348 64.4
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 9.4e-126 454.1 343 62.7
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 2.7e-125 452.6 346 63.6
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 4.7e-125 451.8 347 68.0
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 2.3e-124 449.5 344 63.1
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 3.0e-124 449.1 347 67.1
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 3.9e-124 448.7 346 61.3
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 3.9e-124 448.7 347 63.1
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 5.1e-124 448.4 347 67.1
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 2.6e-123 446.0 345 67.2
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 1.3e-122 443.7 341 66.9
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 1.7e-122 443.4 347 66.0
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 3.7e-122 442.2 343 63.6
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 4.8e-122 441.8 344 60.8
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 8.2e-122 441.0 343 64.4
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 4.1e-121 438.7 344 63.1
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 4.1e-121 438.7 348 66.1
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 5.3e-121 438.3 344 62.5
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 6.9e-121 438.0 344 61.0
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 1.2e-120 437.2 344 64.0
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 2.0e-120 436.4 348 62.6
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 2.0e-120 436.4 345 60.0
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 4.5e-120 435.3 348 63.5
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 7.7e-120 434.5 347 65.1
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 1.3e-119 433.7 347 60.2
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 2.2e-119 433.0 396 54.5
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 2.9e-119 432.6 347 59.4
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 2.9e-119 432.6 358 61.5
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 2.9e-119 432.6 313 72.5
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 1.4e-118 430.3 345 61.2
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 3.2e-118 429.1 358 58.7
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 5.5e-118 428.3 346 59.8
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 5.5e-118 428.3 347 63.4
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 1.2e-117 427.2 344 61.0
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 2.7e-117 426.0 346 64.2
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 1.4e-116 423.7 348 58.0
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 3.0e-116 422.5 345 64.6
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 3.9e-116 422.2 346 63.6
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 7.4e-115 417.9 347 59.1
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 7.4e-115 417.9 346 57.8
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 1.3e-114 417.2 344 58.1
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 1.3e-114 417.2 346 58.1
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.4e-113 413.7 345 61.4
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 1.6e-112 410.2 350 62.3
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.6e-112 410.2 345 61.4
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 2.6e-112 409.5 346 63.0
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 4.5e-112 408.7 345 57.1
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 3.2e-110 402.5 348 62.6
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 1.6e-109 400.2 355 56.3
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 2.1e-109 399.8 345 56.5
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 3.6e-109 399.1 344 61.3
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 6.1e-109 398.3 336 58.0
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 8.0e-109 397.9 347 60.8
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 4.0e-108 395.6 344 61.3
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 5.2e-108 395.2 344 61.9
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 1.5e-107 393.7 344 56.1
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 4.8e-106 388.7 345 54.2
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 1.4e-105 387.1 349 58.5
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 5.3e-105 385.2 344 54.4
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 1.2e-104 384.0 344 54.4
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 2.0e-104 383.3 347 59.4
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 5.9e-104 381.7 346 53.2
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 1.3e-103 380.6 357 58.3
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 2.2e-103 379.8 344 58.1
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 2.2e-103 379.8 349 53.0
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 8.5e-103 377.9 345 52.8
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 5.5e-102 375.2 347 58.2
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 5.5e-102 375.2 347 58.2
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 9.4e-102 374.4 347 58.2
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 1.6e-101 373.6 341 53.7
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 1.6e-101 373.6 349 54.2
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 3.6e-101 372.5 329 61.1
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 5.2e-100 368.6 347 58.2
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 5.2e-100 368.6 348 58.0
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 2.0e-99 366.7 341 54.8
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 5.7e-99 365.2 347 50.4
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 7.5e-99 364.8 345 49.9
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 4.1e-97 359.0 348 56.3
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 2.7e-96 356.3 348 56.9
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 1.2e-88 330.9 347 54.8
Glyma.08G230900 Glycine max HOM05D005549 ORTHO05D006771 2.4e-81 306.6 225 70.2
Cpa.g.c31519.1 Carica papaya HOM05D005549 ORTHO05D006771 3.2e-81 306.2 235 61.7
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 7.0e-81 305.1 345 44.1
arahy.Tifrunner.gnm1.ann1.BVT45G Arachis hypogaea HOM05D005549 ORTHO05D006771 1.2e-80 304.3 219 70.3
HanXRQChr09g0272091 Helianthus annuus HOM05D005549 ORTHO05D006771 1.0e-79 301.2 276 60.1
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 2.3e-79 300.1 341 45.5
arahy.Tifrunner.gnm1.ann1.8228C9 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.1e-76 291.2 209 70.8
arahy.Tifrunner.gnm1.ann1.DCL1V8 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.1e-76 291.2 209 70.8
Atru.chr9.2510 Acer truncatum HOM05D005549 ORTHO05D006771 1.3e-74 284.3 208 62.0
Solyc05g012320.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 9.2e-73 278.1 221 57.0
Solyc05g012300.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 1.2e-72 277.7 221 56.6
ATR0807G008 Amborella trichopoda HOM05D005549 ORTHO05D006771 6.0e-72 275.4 222 55.4
AUR62030941 Chenopodium quinoa HOM05D005549 ORTHO05D006771 2.3e-71 273.5 220 58.2
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 2.3e-71 273.5 385 38.7
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 2.5e-70 270.0 343 42.3
ECA232G2898 Erigeron canadensis HOM05D005549 ORTHO05D006771 6.2e-69 265.4 224 63.8
Potri.012G087300 Populus trichocarpa HOM05D005549 ORTHO05D006771 6.8e-68 261.9 223 55.2
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 7.8e-64 248.4 375 38.1
CSS0043757 Camellia sinensis var. sinensis HOM05D005549 ORTHO05D006771 6.6e-63 245.4 222 55.4
Peaxi162Scf00141g10027 Petunia axillaris HOM05D005549 ORTHO05D006771 1.1e-60 238.0 184 59.2
HanXRQChr16g0506951 Helianthus annuus HOM05D005549 ORTHO05D006771 6.6e-55 218.8 189 55.6
MD06G1171300 Malus domestica HOM05D005549 ORTHO05D006771 1.9e-54 217.2 343 38.5
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 4.4e-51 206.1 186 57.5
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 3.8e-50 203.0 511 29.5
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.9e-49 200.7 186 56.5
HanXRQChr04g0107691 Helianthus annuus HOM05D005549 ORTHO05D006771 5.4e-49 199.1 182 61.5
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 2.1e-48 197.2 223 48.9
Eucgr.H00387 Eucalyptus grandis HOM05D005549 ORTHO05D006771 5.8e-43 179.1 202 44.1
Cre10.g434300 Chlamydomonas reinhardtii HOM05D005549 ORTHO05D006771 1.5e-35 154.5 307 37.1
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 3.8e-34 149.8 123 58.5
MCO16G545 Micromonas commoda HOM05D005549 ORTHO05D006771 7.1e-33 145.6 425 28.5
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 1.6e-29 134.4 107 59.8
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 4.9e-26 122.9 85 68.2
Gohir.D12G085501 Gossypium hirsutum HOM05D005549 ORTHO05D006771 6.5e-26 122.5 140 45.7
TPR.G8752 Trifolium pratense HOM05D005549 ORTHO05D006771 1.1e-25 121.7 87 62.1
Sabra12G0062500 Salix brachista HOM05D005549 ORTHO05D006771 4.1e-20 103.2 95 52.6
MD14G1177000 Malus domestica HOM05D005549 ORTHO05D006771 2.2e-18 97.4 67 65.7
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.1e-16 90.9 99 47.5
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 2.0e-14 84.3 97 46.4


User provided reference genes

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